RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	YLR287C	Q05881	355 aa		4.27	□□□□□ -1.73
YGL088W	YGL088W	CRN1	Q06440	651 aa		4.27	□□□□□ -1.73
YGL088W	YGL088W	CUE5	Q08412	411 aa	Known RBP	4.27	□□□□□ -1.73
YGL088W	YGL088W	NDD1	Q08887	554 aa		4.27	□□□□□ -1.73
YGL088W	YGL088W	GUP2	Q08929	609 aa		4.27	□□□□□ -1.73
YGL088W	YGL088W	APL4	Q12028	832 aa		4.27	□□□□□ -1.73
YGL088W	YGL088W	RIO1	Q12196	484 aa	Known RBP	4.27	□□□□□ -1.73
YGL088W	YGL088W	TIP41	Q12199	356 aa		4.27	□□□□□ -1.73
YGL088W	YGL088W	VAS1	P07806	1104 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	SEC63	P14906	663 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	PUT4	P15380	627 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	APA1	P16550	321 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	RPC31	P17890	251 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	NPR1	P22211	790 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	CAP1	P28495	268 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	PLC1	P32383	869 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	MKK1	P32490	508 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	KAP122	P32767	1081 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	PTR2	P32901	601 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	MRP4	P32902	394 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	DHR2	P36009	735 aa	Predicted RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	YKL023W	P36103	277 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	KAE1	P36132	386 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	YSW1	P38280	609 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	STT3	P39007	718 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	YHB1	P39676	399 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	TMN3	P40071	706 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	QDR1	P40475	563 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	NEO1	P40527	1151 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	AIP1	P46680	615 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	RIP-Chip
YGL088W	YGL088W	ERV25	P54837	211 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	MZM1	Q03429	123 aa	Predicted RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	TRS23	Q03784	219 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	ECM11	Q04110	302 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	ERB1	Q04660	807 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	TDA5	Q06417	326 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
YGL088W	YGL088W	BRX1	Q08235	291 aa	Known RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	CIR2	Q08822	631 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	HUA2	Q12134	243 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	PER33	Q12144	273 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	ADF1	Q2V2Q1	113 aa		4.26	□□□□□ -1.73
YGL088W	YGL088W	HSH49	Q99181	213 aa	Predicted RBP	4.26	□□□□□ -1.73
YGL088W	YGL088W	MRP10	O75012	95 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	GAL10	P04397	699 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	OM45	P16547	393 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	SEN2	P16658	377 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	PRP28	P23394	588 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	SNT1	P25357	1226 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	RPN2	P32565	945 aa	Known RBP	4.25	□□□□□ -1.73
YGL088W	YGL088W	SSE1	P32589	693 aa	Known RBP	4.25	□□□□□ -1.73
YGL088W	YGL088W	AFR1	P33304	620 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	CTP1	P38152	299 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	PSY4	P38193	441 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	ATG14	P38270	344 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	PEX32	P38292	413 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	RSP5	P39940	809 aa	Known RBP	4.25	□□□□□ -1.73
YGL088W	YGL088W	DSE1	P40077	573 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	YIR014W	P40570	242 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	INA22	P40576	216 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	MMM1	P41800	426 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	TYW3	P53177	273 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	ARP5	P53946	755 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	GPD1	Q00055	391 aa	Known RBP	4.25	□□□□□ -1.73
YGL088W	YGL088W	TFB2	Q02939	513 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	PEX25	Q02969	394 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	PIR3	Q03180	325 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	INP2	Q03824	705 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	ORM2	Q06144	216 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	MLC2	Q06580	163 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	NOP6	Q07623	225 aa	Known RBP	4.25	□□□□□ -1.73
YGL088W	YGL088W	YLR012C	Q07927	99 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	TRE2	Q08693	809 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	YPL277C	Q08989	487 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	NBL1	Q3E7Y6	73 aa		4.25	□□□□□ -1.73
YGL088W	YGL088W	TEF1	P02994	458 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	RPP1A	P05318	106 aa	Predicted RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	YKR104W	P0CE69	306 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	PMA2	P19657	947 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	DAL81	P21657	970 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	PPH21	P23594	369 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	NPP1	P25353	742 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	HOG1	P32485	435 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	VPS17	P32913	551 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	TIF3	P34167	436 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
YGL088W	YGL088W	SWH1	P35845	1188 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	NCL1	P38205	684 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	ALG14	P38242	237 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	PET100	P38958	111 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	DSS1	P39112	969 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	RPS26A	P39938	119 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	RPS26B	P39939	119 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	SPF1	P39986	1215 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	MET18	P40469	1032 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	QDR2	P40474	542 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	SPG5	P42933	373 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	CCT7	P42943	550 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	SAM37	P50110	327 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms