RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W PIK1P39104 1066 aa1.56□□□□□ -2.16
SXM1YDR395W TIF4631P39935 952 aaKnown RBP1.56□□□□□ -2.16
SXM1YDR395W UBP7P40453 1071 aa1.56□□□□□ -2.16
SXM1YDR395W QDR2P40474 542 aa1.56□□□□□ -2.16
SXM1YDR395W MET28P40573 187 aa1.56□□□□□ -2.16
SXM1YDR395W MND2P40577 368 aa1.56□□□□□ -2.16
SXM1YDR395W MAD2P40958 196 aa1.56□□□□□ -2.16
SXM1YDR395W LCB2P40970 561 aa1.56□□□□□ -2.16
SXM1YDR395W EPL1P43572 832 aa1.56□□□□□ -2.16
SXM1YDR395W ROK1P45818 564 aaPredicted RBP1.56□□□□□ -2.16
SXM1YDR395W MET12P46151 657 aa1.56□□□□□ -2.16
SXM1YDR395W ARC1P46672 376 aaKnown RBP1.56□□□□□ -2.16
SXM1YDR395W PSP1P50896 841 aaKnown RBP1.56□□□□□ -2.16
SXM1YDR395W YKE2P52553 114 aa1.56□□□□□ -2.16
SXM1YDR395W DSD1P53095 428 aa1.56□□□□□ -2.16
SXM1YDR395W ADA2Q02336 434 aa1.56□□□□□ -2.16
SXM1YDR395W ROD1Q02805 837 aa1.56□□□□□ -2.16
SXM1YDR395W FCP1Q03254 732 aa1.56□□□□□ -2.16
SXM1YDR395W VPS20Q04272 221 aa1.56□□□□□ -2.16
SXM1YDR395W VBA4Q04602 768 aaKnown RBP1.56□□□□□ -2.16
SXM1YDR395W LOT6Q07923 191 aa1.56□□□□□ -2.16
SXM1YDR395W PML1Q07930 204 aaPredicted RBP1.56□□□□□ -2.16
SXM1YDR395W YOR352WQ08816 343 aa1.56□□□□□ -2.16
SXM1YDR395W YPR027CQ12079 277 aa1.56□□□□□ -2.16
SXM1YDR395W MDY2Q12285 212 aa1.56□□□□□ -2.16
SXM1YDR395W RPS21BQ3E754 87 aaKnown RBP1.56□□□□□ -2.16
SXM1YDR395W TPK1P06244 397 aa1.55□□□□□ -2.16
SXM1YDR395W ADH4P10127 382 aa1.55□□□□□ -2.16
SXM1YDR395W ARO3P14843 370 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W SIR1P21691 654 aa1.55□□□□□ -2.16
SXM1YDR395W CPR2P23285 205 aa1.55□□□□□ -2.16
SXM1YDR395W STE11P23561 717 aa1.55□□□□□ -2.16
SXM1YDR395W CAP1P28495 268 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W CRM1P30822 1084 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W PYC2P32327 1180 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W MF(ALPHA)2P32435 120 aa1.55□□□□□ -2.16
SXM1YDR395W SRP101P32916 621 aa1.55□□□□□ -2.16
SXM1YDR395W LOT5P34234 306 aa1.55□□□□□ -2.16
SXM1YDR395W EMC3P36039 253 aa1.55□□□□□ -2.16
SXM1YDR395W MAK5P38112 773 aaPredicted RBP1.55□□□□□ -2.16
SXM1YDR395W YBR284WP38150 797 aa1.55□□□□□ -2.16
SXM1YDR395W CST26P38226 397 aa1.55□□□□□ -2.16
SXM1YDR395W RFS1P38234 210 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W SRP68P38687 599 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W MSR1P38714 643 aa1.55□□□□□ -2.16
SXM1YDR395W MNL1P38888 796 aa1.55□□□□□ -2.16
SXM1YDR395W SMF1P38925 575 aa1.55□□□□□ -2.16
SXM1YDR395W FLC2P39719 783 aa1.55□□□□□ -2.16
SXM1YDR395W AIM10P39965 576 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W YEL057CP39983 233 aa1.55□□□□□ -2.16
SXM1YDR395W NEO1P40527 1151 aa1.55□□□□□ -2.16
SXM1YDR395W TED1P40533 473 aa1.55□□□□□ -2.16
SXM1YDR395W RLP7P40693 322 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W MSS2P40990 351 aa1.55□□□□□ -2.16
SXM1YDR395W ARF3P40994 183 aaRIP-Chip data1.55□□□□□ -2.16 RIP-Chip
SXM1YDR395W ZIM17P42844 174 aa1.55□□□□□ -2.16
SXM1YDR395W ALK1P43633 760 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W YGL176CP46945 554 aa1.55□□□□□ -2.16
SXM1YDR395W ASE1P50275 885 aa1.55□□□□□ -2.16
SXM1YDR395W HFM1P51979 1187 aa1.55□□□□□ -2.16
SXM1YDR395W ALT2P52892 507 aa1.55□□□□□ -2.16
SXM1YDR395W MLC1P53141 149 aa1.55□□□□□ -2.16
SXM1YDR395W LSC1P53598 329 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W RTC4P53850 401 aa1.55□□□□□ -2.16
SXM1YDR395W IMP4P53941 290 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W SNO4Q04902 237 aa1.55□□□□□ -2.16
SXM1YDR395W PUF3Q07807 879 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SXM1YDR395W SMC5Q08204 1093 aa1.55□□□□□ -2.16
SXM1YDR395W YOR296WQ08748 1289 aa1.55□□□□□ -2.16
SXM1YDR395W HSP33Q08914 237 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W HSP32Q08992 237 aa1.55□□□□□ -2.16
SXM1YDR395W TGS1Q12052 315 aa1.55□□□□□ -2.16
SXM1YDR395W ULA1Q12059 462 aa1.55□□□□□ -2.16
SXM1YDR395W DCS2Q12123 353 aa1.55□□□□□ -2.16
SXM1YDR395W LEU9Q12166 604 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W SLP1Q12232 587 aa1.55□□□□□ -2.16
SXM1YDR395W HER1Q12276 1246 aa1.55□□□□□ -2.16
SXM1YDR395W ISA2Q12425 185 aa1.55□□□□□ -2.16
SXM1YDR395W CTF3Q12748 733 aa1.55□□□□□ -2.16
SXM1YDR395W LAG2Q92325 660 aa1.55□□□□□ -2.16
SXM1YDR395W SRN2Q99176 213 aa1.55□□□□□ -2.16
SXM1YDR395W YLR358CO13565 187 aa1.55□□□□□ -2.16
SXM1YDR395W TDH1P00360 332 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W ADE8P04161 214 aa1.55□□□□□ -2.16
SXM1YDR395W STE3P06783 470 aa1.55□□□□□ -2.16
SXM1YDR395W PUT4P15380 627 aa1.55□□□□□ -2.16
SXM1YDR395W MDH1P17505 334 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SXM1YDR395W PWP1P21304 576 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W PHO3P24031 467 aa1.55□□□□□ -2.16
SXM1YDR395W OCA4P25366 362 aa1.55□□□□□ -2.16
SXM1YDR395W RPC82P32349 654 aa1.55□□□□□ -2.16
SXM1YDR395W CDC12P32468 407 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W MGM101P32787 269 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W SET3P36124 751 aa1.55□□□□□ -2.16
SXM1YDR395W UBP13P38187 747 aa1.55□□□□□ -2.16
SXM1YDR395W EFM2P38347 419 aa1.55□□□□□ -2.16
SXM1YDR395W PET100P38958 111 aa1.55□□□□□ -2.16
SXM1YDR395W SSP120P39931 234 aaKnown RBP1.55□□□□□ -2.16
SXM1YDR395W CHS6P40955 746 aa1.55□□□□□ -2.16
SXM1YDR395W IAH1P41734 238 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms