RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	SPR1	P32603	445 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	YBR284W	P38150	797 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	YHI9	P38765	294 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	BZZ1	P38822	633 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	STN1	P38960	494 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	EDC3	P39998	551 aa	Known RBP	6.08	□□□□□ -1.44
RPT3	YDR394W	SPO74	P45819	413 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	NMA2	P53204	395 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	OSH6	Q02201	448 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	INA17	Q02888	182 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	INP2	Q03824	705 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	NHX1	Q04121	633 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	SPG3	Q04398	127 aa	Predicted RBP	6.08	□□□□□ -1.44
RPT3	YDR394W	TMA46	Q12000	345 aa	Known RBP	6.08	□□□□□ -1.44
RPT3	YDR394W	LDB17	Q12342	491 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	HRT3	Q12347	344 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	YMR030W-A	Q3E760	96 aa		6.08	□□□□□ -1.44
RPT3	YDR394W	TOM1	Q03280	3268 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	RHO2	P06781	192 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-DR6	P0CX70	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-ER1	P0CX71	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-LR2	P0CX72	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-PL	P0CX73	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-JR1	P0CX74	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-LR3	P0CX75	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-ML2	P0CX76	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	HSC82	P15108	705 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	SEC14	P24280	304 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	POT1	P27796	417 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
RPT3	YDR394W	PEP7	P32609	515 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	RRN3	P36070	627 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	KAP104	P38217	918 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	ATG12	P38316	186 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	SRP68	P38687	599 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	RIM4	P38741	713 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	YHR182W	P38870	785 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	YHR202W	P38887	602 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	MNN1	P39106	762 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	HOS4	P40480	1083 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	IAH1	P41734	238 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	DIM1	P41819	318 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	CCT7	P42943	550 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	ROK1	P45818	564 aa	Predicted RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	RTT101	P47050	842 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	VPS25	P47142	202 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	ASN2	P49090	572 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	COS6	P53344	381 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	NOP15	P53927	220 aa	Predicted RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	SIW14	P53965	281 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	MTD1	Q02046	320 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	ATP25	Q03153	612 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	HOT1	Q03213	719 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	BCP1	Q06338	283 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	YOL019W	Q08157	551 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	SLD7	Q08457	257 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	YPR202W	Q08993	238 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-GR1	Q12085	440 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
RPT3	YDR394W	SVS1	Q12254	260 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	TY1A-OL	Q92392	440 aa	Known RBP	6.07	□□□□□ -1.44
RPT3	YDR394W	APM4	Q99186	491 aa		6.07	□□□□□ -1.44
RPT3	YDR394W	YPR089W	O13585	888 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	CYC7	P00045	113 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	ATP1	P07251	545 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	PHO4	P07270	312 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	MIS1	P09440	975 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	APE1	P14904	514 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
RPT3	YDR394W	MSB1	P21339	1137 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	MRPS28	P21771	286 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	CLB4	P24871	460 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	ADY2	P25613	283 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	DGR2	P32330	852 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	GDA1	P32621	518 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	MRS6	P32864	603 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	MRP21	P38175	177 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	POA1	P38218	177 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	SLX1	P38324	304 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	YHL041W	P38730	149 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	TRM5	P38793	499 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	YHB1	P39676	399 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	ELO3	P40319	345 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	YJR061W	P40355	935 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	SNG1	P46950	547 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	BFA1	P47113	574 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	UTP8	P53276	713 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	CDC14	Q00684	551 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	CEG1	Q01159	459 aa	Predicted RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	ULP1	Q02724	621 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	RNY1	Q02933	434 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	ACL4	Q03771	387 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	HPT1	Q04178	221 aa	Known RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	YDR109C	Q04585	715 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	YCS4	Q06156	1176 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	SWC7	Q06707	132 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	DIA2	Q08496	732 aa	Predicted RBP	6.06	□□□□□ -1.44
RPT3	YDR394W	YLL054C	Q12244	843 aa		6.06	□□□□□ -1.44
RPT3	YDR394W	TAF3	Q12297	353 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms