RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YNL134CP53912 376 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W UBP2Q01476 1272 aa2.16□□□□□ -2.06
SIR4YDR227W YPL109CQ02981 657 aa2.16□□□□□ -2.06
SIR4YDR227W BUD20Q08004 166 aaPredicted RBP2.16□□□□□ -2.06
SIR4YDR227W RSB1Q08417 382 aa2.16□□□□□ -2.06
SIR4YDR227W YPQ1Q12010 308 aa2.16□□□□□ -2.06
SIR4YDR227W YLL058WQ12198 575 aa2.16□□□□□ -2.06
SIR4YDR227W CMR1Q12510 522 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W PMD1P32634 1753 aa2.16□□□□□ -2.06
SIR4YDR227W IRA2P19158 3079 aa2.16□□□□□ -2.06
SIR4YDR227W GAL80P04387 435 aa2.16□□□□□ -2.06
SIR4YDR227W STE3P06783 470 aa2.16□□□□□ -2.06
SIR4YDR227W ADH4P10127 382 aa2.16□□□□□ -2.06
SIR4YDR227W SED4P25365 1065 aa2.16□□□□□ -2.06
SIR4YDR227W KAR4P25583 335 aa2.16□□□□□ -2.06
SIR4YDR227W PDC6P26263 563 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W DAL80P26343 269 aa2.16□□□□□ -2.06
SIR4YDR227W NTH1P32356 751 aa2.16□□□□□ -2.06
SIR4YDR227W PET309P32522 965 aaPredicted RBP2.16□□□□□ -2.06
SIR4YDR227W MGM101P32787 269 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W DUT1P33317 147 aa2.16□□□□□ -2.06
SIR4YDR227W BAT1P38891 393 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W FTR1P40088 404 aa2.16□□□□□ -2.06
SIR4YDR227W GID8P40208 455 aa2.16□□□□□ -2.06
SIR4YDR227W QRI1P43123 477 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W PFD1P46988 109 aa2.16□□□□□ -2.06
SIR4YDR227W BNA3P47039 444 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W IRC8P47046 822 aa2.16□□□□□ -2.06
SIR4YDR227W VPS25P47142 202 aa2.16□□□□□ -2.06
SIR4YDR227W IGO1P53897 168 aa2.16□□□□□ -2.06
SIR4YDR227W RLI1Q03195 608 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W YML037CQ03703 340 aa2.16□□□□□ -2.06
SIR4YDR227W DON1Q05610 365 aa2.16□□□□□ -2.06
SIR4YDR227W YLR257WQ06146 321 aaKnown RBP2.16□□□□□ -2.06
SIR4YDR227W FLP1P03870 423 aa2.15□□□□□ -2.06
SIR4YDR227W ECM25P32525 599 aa2.15□□□□□ -2.06
SIR4YDR227W YEL1P34225 687 aa2.15□□□□□ -2.06
SIR4YDR227W DID4P36108 232 aa2.15□□□□□ -2.06
SIR4YDR227W TRZ1P36159 838 aaPredicted RBP2.15□□□□□ -2.06
SIR4YDR227W ALG3P38179 458 aa2.15□□□□□ -2.06
SIR4YDR227W ALG5P40350 334 aa2.15□□□□□ -2.06
SIR4YDR227W TAM41P53230 385 aa2.15□□□□□ -2.06
SIR4YDR227W MUK1Q02866 612 aa2.15□□□□□ -2.06
SIR4YDR227W LRS4Q04087 347 aaKnown RBP2.15□□□□□ -2.06
SIR4YDR227W ORM2Q06144 216 aa2.15□□□□□ -2.06
SIR4YDR227W NGL1Q08213 363 aaKnown RBP2.15□□□□□ -2.06
SIR4YDR227W LDB17Q12342 491 aa2.15□□□□□ -2.06
SIR4YDR227W YDR034W-BQ6Q5X2 51 aa2.15□□□□□ -2.06
SIR4YDR227W APE1P14904 514 aa2.15□□□□□ -2.07
SIR4YDR227W MRPL25P23369 157 aa2.15□□□□□ -2.07
SIR4YDR227W RAD14P28519 371 aa2.15□□□□□ -2.07
SIR4YDR227W SUR1P33300 382 aa2.15□□□□□ -2.07
SIR4YDR227W PET10P36139 283 aa2.15□□□□□ -2.07
SIR4YDR227W RFC3P38629 340 aa2.15□□□□□ -2.07
SIR4YDR227W YDR089WP38966 869 aa2.15□□□□□ -2.07
SIR4YDR227W BUR6P40096 142 aa2.15□□□□□ -2.07
SIR4YDR227W UBX6P47049 396 aa2.15□□□□□ -2.07
SIR4YDR227W IBA57P47158 497 aa2.15□□□□□ -2.07
SIR4YDR227W BRO1P48582 844 aa2.15□□□□□ -2.07
SIR4YDR227W AZR1P50080 613 aa2.15□□□□□ -2.07
SIR4YDR227W OCA1P50946 238 aaPredicted RBP2.15□□□□□ -2.07
SIR4YDR227W YGR012WP53206 393 aa2.15□□□□□ -2.07
SIR4YDR227W CAF130P53280 1122 aaPredicted RBP2.15□□□□□ -2.07
SIR4YDR227W PAP2P53632 584 aaKnown RBP2.15□□□□□ -2.07
SIR4YDR227W RSC4Q02206 625 aa2.15□□□□□ -2.07
SIR4YDR227W ADY3Q07732 790 aa2.15□□□□□ -2.07
SIR4YDR227W MDM35O60200 86 aa2.15□□□□□ -2.07
SIR4YDR227W SPT3P06844 337 aa2.15□□□□□ -2.07
SIR4YDR227W RPS4AP0CX35 261 aaKnown RBP2.15□□□□□ -2.07
SIR4YDR227W RPS4BP0CX36 261 aaKnown RBP2.15□□□□□ -2.07
SIR4YDR227W DAL81P21657 970 aa2.15□□□□□ -2.07
SIR4YDR227W GAS1P22146 559 aaKnown RBP2.15□□□□□ -2.07
SIR4YDR227W PCL2P25693 308 aa2.15□□□□□ -2.07
SIR4YDR227W CCR4P31384 837 aaKnown RBP2.15□□□□□ -2.07
SIR4YDR227W HEM12P32347 362 aaPredicted RBP2.15□□□□□ -2.07
SIR4YDR227W RPC37P36121 282 aa2.15□□□□□ -2.07
SIR4YDR227W YBL028CP38202 106 aa2.15□□□□□ -2.07
SIR4YDR227W SHU2P38957 223 aa2.15□□□□□ -2.07
SIR4YDR227W PIG2P40187 538 aa2.15□□□□□ -2.07
SIR4YDR227W SIP5P40210 489 aaKnown RBP2.15□□□□□ -2.07
SIR4YDR227W GTS1P40956 396 aa2.15□□□□□ -2.07
SIR4YDR227W FKH2P41813 862 aa2.15□□□□□ -2.07
SIR4YDR227W ELP2P42935 788 aa2.15□□□□□ -2.07
SIR4YDR227W YFH7P43591 353 aa2.15□□□□□ -2.07
SIR4YDR227W ADE12P80210 433 aaKnown RBP2.15□□□□□ -2.07
SIR4YDR227W YPL272CQ08984 517 aa2.15□□□□□ -2.07
SIR4YDR227W YOL159C-AQ3E769 90 aa2.15□□□□□ -2.07
SIR4YDR227W ARG80P07249 177 aa2.14□□□□□ -2.07
SIR4YDR227W TUB3P09734 445 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W YEL076C-AP0CX16 216 aa2.14□□□□□ -2.07
SIR4YDR227W YLR464WP0CX17 216 aa2.14□□□□□ -2.07
SIR4YDR227W MDH1P17505 334 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SIR4YDR227W VPS34P22543 875 aa2.14□□□□□ -2.07
SIR4YDR227W HXT4P32467 576 aa2.14□□□□□ -2.07
SIR4YDR227W YLF2P38746 405 aa2.14□□□□□ -2.07
SIR4YDR227W LRP1P38801 184 aaKnown RBP2.14□□□□□ -2.07
SIR4YDR227W GIP4P39732 760 aa2.14□□□□□ -2.07
SIR4YDR227W YEL076CP39971 216 aa2.14□□□□□ -2.07
SIR4YDR227W SGN1P40561 250 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SIR4YDR227W MNN11P46985 422 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms