RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	MSD1	P15179	658 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	ADE2	P21264	571 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	VPS34	P22543	875 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	HES1	P35843	434 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	MRPL7	P36519	292 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	YBR053C	P38235	358 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	PPE1	P38796	400 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	AIM18	P38884	321 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	SEC31	P38968	1273 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	FRT2	P39734	528 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	JEM1	P40358	645 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	ATM1	P40416	690 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	ERR3	P42222	437 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	SKP2	P42843	763 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	YGR016W	P53209	190 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	NCE103	P53615	221 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	ESF2	P53743	316 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	SPO19	Q03029	223 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	YDR476C	Q03362	224 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	SKY1	Q03656	742 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	TVP15	Q03860	143 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	RCL1	Q08096	367 aa	Predicted RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	NRT1	Q08485	598 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	CHS5	Q12114	671 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	TY3A-G	Q12173	290 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	RUP1	Q12242	671 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	YMR030W-A	Q3E760	96 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	RGS2	Q99188	309 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	TY3A-I	Q99219	290 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	UBR2	Q07963	1872 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	YAK1	P14680	807 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	MRPS28	P21771	286 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	RPA135	P22138	1203 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	PMI40	P29952	429 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	GDA1	P32621	518 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	NUP120	P35729	1037 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	CUE2	P36075	443 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	DRE2	P36152	348 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	PDX3	P38075	228 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	RIX1	P38883	763 aa	Predicted RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	YAT2	P40017	923 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	MXR1	P40029	184 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	HOS4	P40480	1083 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	MND2	P40577	368 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	CDC1	P40986	491 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	SEC27	P41811	889 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	MIG2	P53035	382 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	YPR003C	P53394	754 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	BRE5	P53741	515 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	KTR6	P54070	446 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	SLT2	Q00772	484 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	FAR10	Q06001	478 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	ENT4	Q07872	247 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RVB1	YDR190C	AAD15	Q08361	143 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	SLD7	Q08457	257 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	YOR022C	Q12204	715 aa		4.78	□□□□□ -1.64
RVB1	YDR190C	TY1A-NL1	Q12391	440 aa	Known RBP	4.78	□□□□□ -1.64
RVB1	YDR190C	TOM1	Q03280	3268 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	MPH2	P0CD99	609 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	RSA4	P25382	515 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	GAC1	P28006	793 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	HRR25	P29295	494 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	CDC12	P32468	407 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	CSE2	P33308	149 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	TFC3	P34111	1160 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	AST1	P35183	429 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	KDX1	P36005	433 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	GPT2	P36148	743 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	YKR078W	P36158	585 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	APE3	P37302	537 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	YRO2	P38079	344 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	CTP1	P38152	299 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	MAM33	P40513	266 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	GVP36	P40531	326 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	SET2	P46995	733 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	IML2	P47031	731 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	ASN2	P49090	572 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	TAN1	P53072	289 aa	Predicted RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	COG2	P53271	262 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	REX2	P54964	269 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	RPM2	Q02773	1202 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	YMR155W	Q03795	547 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	CSN9	Q03981	162 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	ARA2	Q04212	335 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	YKU80	Q04437	629 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	BCP1	Q06338	283 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	MET7	Q08645	548 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	DDC1	Q08949	612 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	YDL176W	Q12027	708 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	KCS1	Q12494	1050 aa		4.77	□□□□□ -1.65
RVB1	YDR190C	EFG1	Q3E705	233 aa	Known RBP	4.77	□□□□□ -1.65
RVB1	YDR190C	SNA3	P14359	133 aa		4.76	□□□□□ -1.65
RVB1	YDR190C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
RVB1	YDR190C	SAN1	P22470	610 aa		4.76	□□□□□ -1.65
RVB1	YDR190C	VPS3	P23643	1011 aa		4.76	□□□□□ -1.65
RVB1	YDR190C	PHA2	P32452	334 aa		4.76	□□□□□ -1.65
RVB1	YDR190C	DPH5	P32469	300 aa	Predicted RBP	4.76	□□□□□ -1.65
RVB1	YDR190C	SLA2	P33338	968 aa		4.76	□□□□□ -1.65
RVB1	YDR190C	ATG12	P38316	186 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms