RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	CUE3	P53137	624 aa	Known RBP	4.4	□□□□□ -1.71
HSP42	YDR171W	UBP16	Q02863	499 aa		4.4	□□□□□ -1.71
HSP42	YDR171W	SDH5	Q08230	162 aa		4.4	□□□□□ -1.71
HSP42	YDR171W	OSW1	Q08692	278 aa		4.4	□□□□□ -1.71
HSP42	YDR171W	ADE3	P07245	946 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	RPB2	P08518	1224 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	CKI1	P20485	582 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	SIR1	P21691	654 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	RIT1	P23796	513 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	ILV6	P25605	309 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	YCR061W	P25639	631 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	FRD1	P32614	470 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	TFC3	P34111	1160 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	OLA1	P38219	394 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	SMF1	P38925	575 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	IMO32	P53219	342 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	RTS3	P53289	263 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	ESF2	P53743	316 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	UBX4	P54730	416 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	SEC5	P89102	971 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	MRD1	Q06106	887 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	NEW1	Q08972	1196 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	AHA1	Q12449	350 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	PGA3	Q12746	312 aa	Known RBP	4.39	□□□□□ -1.71
HSP42	YDR171W	YER175W-A	Q8TGU4	54 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	AI5_ALPHA	Q9ZZX1	630 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	BNI1	P41832	1953 aa		4.39	□□□□□ -1.71
HSP42	YDR171W	LPD1	P09624	499 aa	Known RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	AQY1	P0CD91	305 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	ERG11	P10614	530 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	MTF2	P10849	440 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	PHO81	P17442	1178 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	AMD2	P22580	549 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	MCM3	P24279	971 aa	Known RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	CLB4	P24871	460 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	BUD14	P27637	709 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	BMH1	P29311	267 aa	Known RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	SAC6	P32599	642 aa	Known RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	LOS1	P33418	1100 aa	Predicted RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	CTM1	P38818	585 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	SHQ1	P40486	507 aa	Predicted RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	CAB2	P40506	365 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	PIB2	P53191	635 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	NGL3	Q03210	505 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	UBX2	Q04228	584 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	MRI1	Q06489	411 aa	Known RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	IWR1	Q07532	353 aa	Predicted RBP	4.38	□□□□□ -1.71
HSP42	YDR171W	AIM6	Q07716	390 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	CRT10	Q08226	957 aa		4.38	□□□□□ -1.71
HSP42	YDR171W	SUP35	P05453	685 aa	Known RBP	4.37	□□□□□ -1.71
HSP42	YDR171W	YMR085W	P0CF18	432 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	HOM2	P13663	365 aa	Known RBP	4.37	□□□□□ -1.71
HSP42	YDR171W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
HSP42	YDR171W	RPL5	P26321	297 aa	Known RBP	4.37	□□□□□ -1.71
HSP42	YDR171W	IMP2'	P32351	346 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	PUP2	P32379	260 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	LIN1	P38852	340 aa	Predicted RBP	4.37	□□□□□ -1.71
HSP42	YDR171W	EXO1	P39875	702 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	YIL001W	P40560	513 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	IAH1	P41734	238 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	ADE16	P54113	591 aa	Known RBP	4.37	□□□□□ -1.71
HSP42	YDR171W	HOT1	Q03213	719 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	INP2	Q03824	705 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	RAD33	Q04231	177 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	SPC24	Q04477	213 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	YML053C	Q04978	212 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	TAF10	Q12030	206 aa		4.37	□□□□□ -1.71
HSP42	YDR171W	JIP3	O13555	125 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	CDC37	P06101	506 aa	Known RBP	4.36	□□□□□ -1.71
HSP42	YDR171W	GCD2	P12754	651 aa	Predicted RBP	4.36	□□□□□ -1.71
HSP42	YDR171W	RAD57	P25301	460 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	RPC34	P32910	317 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	YET1	P35723	206 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	HOT13	P36078	116 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	ACA1	P39970	489 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	RPT2	P40327	437 aa	Known RBP	4.36	□□□□□ -1.71
HSP42	YDR171W	EPL1	P43572	832 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	CPR6	P53691	371 aa	Known RBP	4.36	□□□□□ -1.71
HSP42	YDR171W	ZDS2	P54786	942 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	ADA2	Q02336	434 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	ARA2	Q04212	335 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	VTI1	Q04338	217 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	YLR287C	Q05881	355 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	ORM2	Q06144	216 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	AFT2	Q08957	416 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	NDJ1	Q12366	352 aa		4.36	□□□□□ -1.71
HSP42	YDR171W	YMR084W	A2P2R3	262 aa		4.35	□□□□□ -1.71
HSP42	YDR171W	MIS1	P09440	975 aa	Known RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	TAL1	P15019	335 aa	Known RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	PAP1	P29468	568 aa	Known RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	PSO2	P30620	661 aa		4.35	□□□□□ -1.71
HSP42	YDR171W	HXT1	P32465	570 aa		4.35	□□□□□ -1.71
HSP42	YDR171W	NIP1	P32497	812 aa	Known RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	UBC6	P33296	250 aa	Predicted RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	BMH2	P34730	273 aa	Known RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	LAS1	P36146	502 aa	Predicted RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	YBR138C	P38277	524 aa		4.35	□□□□□ -1.71
HSP42	YDR171W	SPP381	P38282	291 aa	Predicted RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	YMR124W	P39523	943 aa	Known RBP	4.35	□□□□□ -1.71
HSP42	YDR171W	PUG1	P40100	303 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms