RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W ILV2P07342 687 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W PDC5P16467 563 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W GRX2P17695 143 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W ACE2P21192 770 aa4.18□□□□□ -1.74
TRS85YDR108W SGV1P23293 657 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W CPR3P25719 182 aa4.18□□□□□ -1.74
TRS85YDR108W SDS22P36047 338 aa4.18□□□□□ -1.74
TRS85YDR108W YKL023WP36103 277 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W CHK1P38147 527 aa4.18□□□□□ -1.74
TRS85YDR108W PBP2P38151 413 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
TRS85YDR108W PRS2P38620 318 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W YHR078WP38799 552 aa4.18□□□□□ -1.74
TRS85YDR108W ATG7P38862 630 aa4.18□□□□□ -1.74
TRS85YDR108W GTT1P40582 234 aa4.18□□□□□ -1.74
TRS85YDR108W YFL034WP43564 1073 aa4.18□□□□□ -1.74
TRS85YDR108W RET2P43621 546 aa4.18□□□□□ -1.74
TRS85YDR108W AIP1P46680 615 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W YJL016WP47072 561 aa4.18□□□□□ -1.74
TRS85YDR108W PRP24P49960 444 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W SAP4P53036 818 aa4.18□□□□□ -1.74
TRS85YDR108W PIB2P53191 635 aa4.18□□□□□ -1.74
TRS85YDR108W SNF12P53628 566 aa4.18□□□□□ -1.74
TRS85YDR108W ALO1P54783 526 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W SKI8Q02793 397 aaPredicted RBP4.18□□□□□ -1.74
TRS85YDR108W KAP120Q02932 1032 aa4.18□□□□□ -1.74
TRS85YDR108W RRN5Q02983 363 aa4.18□□□□□ -1.74
TRS85YDR108W YDR249CQ03787 373 aa4.18□□□□□ -1.74
TRS85YDR108W TIF35Q04067 274 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W ARP10Q04549 284 aa4.18□□□□□ -1.74
TRS85YDR108W IWR1Q07532 353 aaPredicted RBP4.18□□□□□ -1.74
TRS85YDR108W COS7Q07788 383 aa4.18□□□□□ -1.74
TRS85YDR108W YEH1Q07804 573 aa4.18□□□□□ -1.74
TRS85YDR108W NTG2Q08214 380 aa4.18□□□□□ -1.74
TRS85YDR108W DIA2Q08496 732 aaPredicted RBP4.18□□□□□ -1.74
TRS85YDR108W MUM3Q08750 479 aa4.18□□□□□ -1.74
TRS85YDR108W YPR202WQ08993 238 aa4.18□□□□□ -1.74
TRS85YDR108W REX3Q12090 404 aa4.18□□□□□ -1.74
TRS85YDR108W HER1Q12276 1246 aa4.18□□□□□ -1.74
TRS85YDR108W YOR131CQ12486 218 aa4.18□□□□□ -1.74
TRS85YDR108W AVL9Q12500 764 aa4.18□□□□□ -1.74
TRS85YDR108W YHR213W-AQ8TGT4 77 aa4.18□□□□□ -1.74
TRS85YDR108W TSC13Q99190 310 aa4.18□□□□□ -1.74
TRS85YDR108W ARG3P05150 338 aa4.18□□□□□ -1.74
TRS85YDR108W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
TRS85YDR108W STE3P06783 470 aa4.18□□□□□ -1.74
TRS85YDR108W ERG11P10614 530 aa4.18□□□□□ -1.74
TRS85YDR108W ABF1P14164 731 aa4.18□□□□□ -1.74
TRS85YDR108W NSP1P14907 823 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W SAR1P20606 190 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W RNR3P21672 869 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W VMA16P23968 213 aa4.18□□□□□ -1.74
TRS85YDR108W NPP1P25353 742 aa4.18□□□□□ -1.74
TRS85YDR108W SRO9P25567 434 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W PGS1P25578 521 aa4.18□□□□□ -1.74
TRS85YDR108W SPT14P32363 452 aa4.18□□□□□ -1.74
TRS85YDR108W NUP2P32499 720 aa4.18□□□□□ -1.74
TRS85YDR108W VAM7P32912 316 aa4.18□□□□□ -1.74
TRS85YDR108W CUE2P36075 443 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W ECM2P38241 364 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W TSC10P38342 320 aa4.18□□□□□ -1.74
TRS85YDR108W YBR285WP38354 144 aa4.18□□□□□ -1.74
TRS85YDR108W GLO3P38682 493 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W PZF1P39933 429 aa4.18□□□□□ -1.74
TRS85YDR108W YEN1P40028 759 aa4.18□□□□□ -1.74
TRS85YDR108W YMR134WP40207 237 aa4.18□□□□□ -1.74
TRS85YDR108W PFK26P40433 827 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W UTP25P40498 721 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W ERG10P41338 398 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W MMM1P41800 426 aa4.18□□□□□ -1.74
TRS85YDR108W JJJ3P47138 172 aa4.18□□□□□ -1.74
TRS85YDR108W ROM1P53046 1155 aa4.18□□□□□ -1.74
TRS85YDR108W RAI1P53063 387 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W COG1P53079 417 aa4.18□□□□□ -1.74
TRS85YDR108W MND1P53102 219 aa4.18□□□□□ -1.74
TRS85YDR108W YGL117WP53133 265 aa4.18□□□□□ -1.74
TRS85YDR108W MLC1P53141 149 aa4.18□□□□□ -1.74
TRS85YDR108W RET3P53600 189 aa4.18□□□□□ -1.74
TRS85YDR108W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
TRS85YDR108W EEB1Q02891 456 aa4.18□□□□□ -1.74
TRS85YDR108W YMR226CQ05016 267 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W RBS1Q05672 457 aaKnown RBP4.18□□□□□ -1.74
TRS85YDR108W YPL191CQ08930 360 aa4.18□□□□□ -1.74
TRS85YDR108W FLC1Q08967 793 aa4.18□□□□□ -1.74
TRS85YDR108W YOR214CQ12282 236 aa4.18□□□□□ -1.74
TRS85YDR108W LDB17Q12342 491 aa4.18□□□□□ -1.74
TRS85YDR108W DCN1Q12395 269 aa4.18□□□□□ -1.74
TRS85YDR108W GAL10P04397 699 aa4.17□□□□□ -1.74
TRS85YDR108W GPH1P06738 902 aaKnown RBP4.17□□□□□ -1.74
TRS85YDR108W HOM3P10869 527 aa4.17□□□□□ -1.74
TRS85YDR108W EXO70P19658 623 aa4.17□□□□□ -1.74
TRS85YDR108W KGD1P20967 1014 aaKnown RBP4.17□□□□□ -1.74
TRS85YDR108W RRT12P25381 491 aa4.17□□□□□ -1.74
TRS85YDR108W YDJ1P25491 409 aaKnown RBP4.17□□□□□ -1.74
TRS85YDR108W YCR101CP25607 182 aa4.17□□□□□ -1.74
TRS85YDR108W NAM9P27929 486 aa4.17□□□□□ -1.74
TRS85YDR108W IMP2'P32351 346 aa4.17□□□□□ -1.74
TRS85YDR108W ORC2P32833 620 aa4.17□□□□□ -1.74
TRS85YDR108W YHR045WP38775 560 aa4.17□□□□□ -1.74
TRS85YDR108W UTP9P38882 575 aaKnown RBP4.17□□□□□ -1.74
TRS85YDR108W STL1P39932 569 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 77.8 ms