RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YOR111WQ99210 232 aa3.14□□□□□ -1.91
SHS1YDL225W RAP1P11938 827 aa3.14□□□□□ -1.91
SHS1YDL225W YCK1P23291 538 aa3.14□□□□□ -1.91
SHS1YDL225W STE50P25344 346 aa3.14□□□□□ -1.91
SHS1YDL225W PAH1P32567 862 aa3.14□□□□□ -1.91
SHS1YDL225W NOP16P40007 231 aaKnown RBP3.14□□□□□ -1.91
SHS1YDL225W DPB11P47027 764 aaPredicted RBP3.14□□□□□ -1.91
SHS1YDL225W UPF3P48412 387 aaKnown RBP3.14□□□□□ -1.91
SHS1YDL225W YPT11P48559 417 aa3.14□□□□□ -1.91
SHS1YDL225W YNL144CP53907 740 aa3.14□□□□□ -1.91
SHS1YDL225W ASI1P54074 624 aa3.14□□□□□ -1.91
SHS1YDL225W VTC3Q02725 835 aa3.14□□□□□ -1.91
SHS1YDL225W RIX7Q07844 837 aaKnown RBP3.14□□□□□ -1.91
SHS1YDL225W ATX2Q12067 313 aa3.14□□□□□ -1.91
SHS1YDL225W YPR089WO13585 888 aa3.13□□□□□ -1.91
SHS1YDL225W AAC3P18238 307 aa3.13□□□□□ -1.91
SHS1YDL225W SAC1P32368 623 aaKnown RBP3.13□□□□□ -1.91
SHS1YDL225W SCO2P38072 301 aa3.13□□□□□ -1.91
SHS1YDL225W MAL33P38157 468 aa3.13□□□□□ -1.91
SHS1YDL225W YBL029WP38201 376 aa3.13□□□□□ -1.91
SHS1YDL225W TOM71P38825 639 aaKnown RBP3.13□□□□□ -1.91
SHS1YDL225W PKP1P40530 394 aa3.13□□□□□ -1.91
SHS1YDL225W LYS4P49367 693 aaPredicted RBP3.13□□□□□ -1.91
SHS1YDL225W RPL15BP54780 204 aaPredicted RBP3.13□□□□□ -1.91
SHS1YDL225W PSR1Q07800 427 aa3.13□□□□□ -1.91
SHS1YDL225W YOL159CQ08300 171 aa3.13□□□□□ -1.91
SHS1YDL225W TCO89Q08921 799 aa3.13□□□□□ -1.91
SHS1YDL225W HUA2Q12134 243 aa3.13□□□□□ -1.91
SHS1YDL225W ATG9Q12142 997 aa3.13□□□□□ -1.91
SHS1YDL225W ICT1Q12385 394 aa3.13□□□□□ -1.91
SHS1YDL225W PDB1P32473 366 aaKnown RBP3.12□□□□□ -1.91
SHS1YDL225W AUR1P36107 401 aaPredicted RBP3.12□□□□□ -1.91
SHS1YDL225W YNG2P38806 282 aaKnown RBP3.12□□□□□ -1.91
SHS1YDL225W NAB3P38996 802 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SHS1YDL225W VPS25P47142 202 aa3.12□□□□□ -1.91
SHS1YDL225W DUO1P53168 247 aaKnown RBP3.12□□□□□ -1.91
SHS1YDL225W NNF2P53253 936 aa3.12□□□□□ -1.91
SHS1YDL225W YTP1P53584 459 aa3.12□□□□□ -1.91
SHS1YDL225W MRPL1Q04599 285 aa3.12□□□□□ -1.91
SHS1YDL225W TMA64Q04600 565 aaKnown RBP3.12□□□□□ -1.91
SHS1YDL225W YAP7Q08182 245 aa3.12□□□□□ -1.91
SHS1YDL225W INP53Q12271 1107 aa3.12□□□□□ -1.91
SHS1YDL225W HER1Q12276 1246 aa3.12□□□□□ -1.91
SHS1YDL225W YBR126W-AQ8TGU7 68 aa3.12□□□□□ -1.91
SHS1YDL225W PWP1P21304 576 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W MNN2P38069 597 aa3.11□□□□□ -1.91
SHS1YDL225W DIA4P38705 446 aaPredicted RBP3.11□□□□□ -1.91
SHS1YDL225W YMR124WP39523 943 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W UIP3P39547 235 aa3.11□□□□□ -1.91
SHS1YDL225W SMC3P47037 1230 aa3.11□□□□□ -1.91
SHS1YDL225W RPS7BP48164 190 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W VPS72Q03388 795 aa3.11□□□□□ -1.91
SHS1YDL225W POS5Q06892 414 aa3.11□□□□□ -1.91
SHS1YDL225W YLR112WQ12130 139 aa3.11□□□□□ -1.91
SHS1YDL225W SEM1O94742 89 aa3.11□□□□□ -1.91
SHS1YDL225W YPT1P01123 206 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W KRS1P15180 591 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W KAR3P17119 729 aa3.11□□□□□ -1.91
SHS1YDL225W AIM17P23180 465 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W VMA16P23968 213 aa3.11□□□□□ -1.91
SHS1YDL225W LCB1P25045 558 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W POL4P25615 582 aa3.11□□□□□ -1.91
SHS1YDL225W MGM1P32266 881 aa3.11□□□□□ -1.91
SHS1YDL225W SNU114P36048 1008 aaKnown RBP3.11□□□□□ -1.91
SHS1YDL225W CAC2Q04199 468 aa3.11□□□□□ -1.91
SHS1YDL225W RRI2Q12348 645 aa3.11□□□□□ -1.91
SHS1YDL225W SPE2P21182 396 aa3.1□□□□□ -1.91
SHS1YDL225W CLB2P24869 491 aa3.1□□□□□ -1.91
SHS1YDL225W YCP4P25349 247 aaKnown RBP3.1□□□□□ -1.91
SHS1YDL225W IMP2'P32351 346 aa3.1□□□□□ -1.91
SHS1YDL225W AGP2P38090 596 aa3.1□□□□□ -1.91
SHS1YDL225W ELO1P39540 310 aa3.1□□□□□ -1.91
SHS1YDL225W PCI8P40512 444 aa3.1□□□□□ -1.91
SHS1YDL225W STR3P53101 465 aaKnown RBP3.1□□□□□ -1.91
SHS1YDL225W YMR178WQ03219 274 aaKnown RBP3.1□□□□□ -1.91
SHS1YDL225W GSH2Q08220 491 aa3.1□□□□□ -1.91
SHS1YDL225W GEP3Q08622 556 aa3.1□□□□□ -1.91
SHS1YDL225W APL4Q12028 832 aa3.1□□□□□ -1.91
SHS1YDL225W CBP1P07252 654 aa3.09□□□□□ -1.91
SHS1YDL225W SEC53P07283 254 aaKnown RBP3.09□□□□□ -1.91
SHS1YDL225W SAC6P32599 642 aaKnown RBP3.09□□□□□ -1.91
SHS1YDL225W YKL050CP35736 922 aa3.09□□□□□ -1.91
SHS1YDL225W NOP4P37838 685 aaKnown RBP3.09□□□□□ -1.91
SHS1YDL225W RFC1P38630 861 aaKnown RBP3.09□□□□□ -1.91
SHS1YDL225W ANS1P38832 159 aa3.09□□□□□ -1.91
SHS1YDL225W SPC97P38863 823 aa3.09□□□□□ -1.91
SHS1YDL225W VRG4P40107 337 aa3.09□□□□□ -1.91
SHS1YDL225W HXT9P40885 567 aa3.09□□□□□ -1.91
SHS1YDL225W DIA3P52290 468 aa3.09□□□□□ -1.91
SHS1YDL225W LCL3P53153 274 aa3.09□□□□□ -1.91
SHS1YDL225W SCW4P53334 386 aaKnown RBP3.09□□□□□ -1.91
SHS1YDL225W ZDS2P54786 942 aa3.09□□□□□ -1.91
SHS1YDL225W NGL3Q03210 505 aa3.09□□□□□ -1.91
SHS1YDL225W ARP10Q04549 284 aa3.09□□□□□ -1.91
SHS1YDL225W YPL272CQ08984 517 aa3.09□□□□□ -1.91
SHS1YDL225W NMD4Q12129 218 aa3.09□□□□□ -1.91
SHS1YDL225W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
SHS1YDL225W ARD1P07347 238 aaPredicted RBP3.08□□□□□ -1.92
SHS1YDL225W ADH7P25377 361 aa3.08□□□□□ -1.92
SHS1YDL225W TMT1P32643 299 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 136.7 ms