RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	MRPL10	P36520	322 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	FAA3	P39002	694 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	DDI1	P40087	428 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	SIP5	P40210	489 aa	Known RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	ALG8	P40351	577 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	FET4	P40988	552 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	ERR3	P42222	437 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	LSM8	P47093	109 aa	Known RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	RSM26	P47141	266 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	PRP24	P49960	444 aa	Known RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	YGR125W	P53273	1036 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	COQ6	P53318	479 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	APP1	P53933	587 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	ACS1	Q01574	713 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	YMR265C	Q03508	461 aa	Known RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	GPI13	Q07830	1017 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	SMC5	Q08204	1093 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	GPN2	Q08726	347 aa	Predicted RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	YPR022C	Q12139	1133 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	NCA2	Q12374	616 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	PCD1	Q12524	340 aa		5.8	□□□□□ -1.48
SUB2	YDL084W	THO2	P53552	1597 aa	Known RBP	5.8	□□□□□ -1.48
SUB2	YDL084W	TRM732	Q03496	1420 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	ENO2	P00925	437 aa	Known RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	RAD1	P06777	1100 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	CBP6	P07253	162 aa	Predicted RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	GPA2	P10823	449 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	GCN3	P14741	305 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	CDC23	P16522	626 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
SUB2	YDL084W	SWI4	P25302	1093 aa	Known RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	ERG3	P32353	365 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	SQT1	P35184	431 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	CDS1	P38221	457 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	YBR238C	P38330	731 aa	Known RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	NEM1	P38757	446 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	SBE22	P38814	852 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	MSS4	P38994	779 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	GVP36	P40531	326 aa	Known RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	GAB1	P41733	394 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	RMD8	P43620	662 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	YJL181W	P46987	611 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	NPA3	P47122	385 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	YJR141W	P47172	347 aa	Predicted RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	PRP31	P49704	494 aa	Predicted RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	PSP1	P50896	841 aa	Known RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	YGR117C	P53270	476 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	YGR127W	P53275	312 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	CWC27	Q02770	301 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	GCN5	Q03330	439 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	RCO1	Q04779	684 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	HRQ1	Q05549	1077 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	HCR1	Q05775	265 aa	Known RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	YLR173W	Q06247	608 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	REX4	Q08237	289 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	TGL5	Q12043	749 aa		5.79	□□□□□ -1.48
SUB2	YDL084W	PGA3	Q12746	312 aa	Known RBP	5.79	□□□□□ -1.48
SUB2	YDL084W	SEM1	O94742	89 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	GCN4	P03069	281 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	LEU4	P06208	619 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	GPH1	P06738	902 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	SRD1	P09007	221 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	YGL041W-A	P0C5N3	154 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	RPS24A	P0CX31	135 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	RPS24B	P0CX32	135 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	NSP1	P14907	823 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	TEC1	P18412	486 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	PRI2	P20457	528 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	APA2	P22108	325 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	RNA15	P25299	296 aa	Predicted RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	KTR1	P27810	393 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	ATP7	P30902	174 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	HXT3	P32466	567 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	TCA17	P32613	152 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	YKU70	P32807	602 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	SUI1	P32911	108 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	KES1	P35844	434 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	DAD2	P36162	133 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	MAL32	P38158	584 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	WSS1	P38838	269 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	CCT6	P39079	546 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	FHL1	P39521	936 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	OAF1	P39720	1047 aa	Predicted RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	SEC72	P39742	193 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	RPS26A	P39938	119 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	RPS26B	P39939	119 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	YER085C	P40058	173 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	OTU1	P43558	301 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	FET5	P43561	622 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	VOA1	P53262	265 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	MAL12	P53341	584 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	PRM1	P53835	661 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	PRM15	Q03262	622 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	NGL2	Q03264	515 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	BNA7	Q04066	261 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	YDR444W	Q04093	687 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	CRF1	Q04930	467 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	BLS1	Q06071	122 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	HBT1	Q07653	1046 aa	Known RBP	5.78	□□□□□ -1.48
SUB2	YDL084W	SPO75	Q07798	868 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms