RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	PET122	P10355	254 aa		3.11	□□□□□ -1.91
HMRA1	YCR097W	LHS1	P36016	881 aa		3.11	□□□□□ -1.91
HMRA1	YCR097W	PHO90	P39535	881 aa		3.11	□□□□□ -1.91
HMRA1	YCR097W	MRX1	P40050	688 aa		3.11	□□□□□ -1.91
HMRA1	YCR097W	SMK1	P41808	388 aa		3.11	□□□□□ -1.91
HMRA1	YCR097W	CTK2	P46962	323 aa		3.11	□□□□□ -1.91
HMRA1	YCR097W	TDA7	P53882	636 aa	Predicted RBP	3.11	□□□□□ -1.91
HMRA1	YCR097W	GCD7	P32502	381 aa	Predicted RBP	3.1	□□□□□ -1.91
HMRA1	YCR097W	FPR3	P38911	411 aa	Known RBP	3.1	□□□□□ -1.91
HMRA1	YCR097W	YIL060W	P40519	144 aa		3.1	□□□□□ -1.91
HMRA1	YCR097W	RTT101	P47050	842 aa		3.1	□□□□□ -1.91
HMRA1	YCR097W	COG6	P53959	839 aa		3.1	□□□□□ -1.91
HMRA1	YCR097W	ERP1	Q05359	219 aa	Known RBP	3.1	□□□□□ -1.91
HMRA1	YCR097W	ARP7	Q12406	477 aa		3.1	□□□□□ -1.91
HMRA1	YCR097W	ENP1	P38333	483 aa	Known RBP	3.09	□□□□□ -1.91
HMRA1	YCR097W	STT3	P39007	718 aa	Known RBP	3.09	□□□□□ -1.91
HMRA1	YCR097W	RPR2	P40571	144 aa		3.09	□□□□□ -1.91
HMRA1	YCR097W	SIR1	P21691	654 aa		3.08	□□□□□ -1.92
HMRA1	YCR097W	TFC4	P33339	1025 aa		3.08	□□□□□ -1.92
HMRA1	YCR097W	PAL1	Q05518	499 aa	Known RBP	3.08	□□□□□ -1.92
HMRA1	YCR097W	STP3	Q05937	343 aa		3.08	□□□□□ -1.92
HMRA1	YCR097W	RIT1	P23796	513 aa		3.07	□□□□□ -1.92
HMRA1	YCR097W	GAC1	P28006	793 aa		3.07	□□□□□ -1.92
HMRA1	YCR097W	ACH1	P32316	526 aa		3.07	□□□□□ -1.92
HMRA1	YCR097W	PHD1	P36093	366 aa		3.07	□□□□□ -1.92
HMRA1	YCR097W	UBP12	P39538	1254 aa		3.07	□□□□□ -1.92
HMRA1	YCR097W	MAD3	P47074	515 aa		3.07	□□□□□ -1.92
HMRA1	YCR097W	PKP2	P53170	491 aa		3.07	□□□□□ -1.92
HMRA1	YCR097W	ADE3	P07245	946 aa	Known RBP	3.06	□□□□□ -1.92
HMRA1	YCR097W	BIK1	P11709	440 aa		3.06	□□□□□ -1.92
HMRA1	YCR097W	SOF1	P33750	489 aa	Known RBP	3.06	□□□□□ -1.92
HMRA1	YCR097W	IDP2	P41939	412 aa		3.06	□□□□□ -1.92
HMRA1	YCR097W	YJR120W	P47157	116 aa		3.06	□□□□□ -1.92
HMRA1	YCR097W	RBA50	Q04418	439 aa		3.06	□□□□□ -1.92
HMRA1	YCR097W	FMP45	Q07651	309 aa		3.06	□□□□□ -1.92
HMRA1	YCR097W	SWT1	Q12104	458 aa		3.06	□□□□□ -1.92
HMRA1	YCR097W	TMA17	Q12513	150 aa		3.06	□□□□□ -1.92
HMRA1	YCR097W	SOD1	P00445	154 aa	Known RBP	3.05	□□□□□ -1.92
HMRA1	YCR097W	NDC1	P32500	655 aa		3.05	□□□□□ -1.92
HMRA1	YCR097W	GEX2	P36173	615 aa		3.05	□□□□□ -1.92
HMRA1	YCR097W	AAP1	P37898	856 aa	Known RBP	3.05	□□□□□ -1.92
HMRA1	YCR097W	CEG1	Q01159	459 aa	Predicted RBP	3.05	□□□□□ -1.92
HMRA1	YCR097W	MSS11	Q03825	758 aa		3.05	□□□□□ -1.92
HMRA1	YCR097W	MTF1	P14908	341 aa	Known RBP	3.04	□□□□□ -1.92
HMRA1	YCR097W	MCM4	P30665	933 aa	Known RBP	3.04	□□□□□ -1.92
HMRA1	YCR097W	ARP2	P32381	391 aa	Known RBP	3.04	□□□□□ -1.92
HMRA1	YCR097W	CRN1	Q06440	651 aa		3.04	□□□□□ -1.92
HMRA1	YCR097W	GRC3	Q07845	632 aa		3.04	□□□□□ -1.92
HMRA1	YCR097W	SPC110	P32380	944 aa		3.03	□□□□□ -1.92
HMRA1	YCR097W	MSN2	P33748	704 aa		3.03	□□□□□ -1.92
HMRA1	YCR097W	NTR2	P36118	322 aa	Predicted RBP	3.03	□□□□□ -1.92
HMRA1	YCR097W	ECM10	P39987	644 aa		3.03	□□□□□ -1.92
HMRA1	YCR097W	HEL2	Q05580	639 aa	Known RBP	3.03	□□□□□ -1.92
HMRA1	YCR097W	ARP6	Q12509	438 aa		3.03	□□□□□ -1.92
HMRA1	YCR097W	POL3	P15436	1097 aa		3.02	□□□□□ -1.93
HMRA1	YCR097W	SWI4	P25302	1093 aa	Known RBP	3.02	□□□□□ -1.93
HMRA1	YCR097W	MIA40	P36046	403 aa		3.02	□□□□□ -1.93
HMRA1	YCR097W	AXL1	P40851	1208 aa		3.02	□□□□□ -1.93
HMRA1	YCR097W	RPN11	P43588	306 aa	Known RBP	3.02	□□□□□ -1.93
HMRA1	YCR097W	YGL039W	P53183	348 aa	Known RBP	3.02	□□□□□ -1.93
HMRA1	YCR097W	IWR1	Q07532	353 aa	Predicted RBP	3.02	□□□□□ -1.93
HMRA1	YCR097W	TMC1	Q08422	150 aa	Predicted RBP	3.02	□□□□□ -1.93
HMRA1	YCR097W	NAT1	P12945	854 aa	Known RBP	3.01	□□□□□ -1.93
HMRA1	YCR097W	YTA12	P40341	825 aa		3.01	□□□□□ -1.93
HMRA1	YCR097W	IMA1	P53051	589 aa		3.01	□□□□□ -1.93
HMRA1	YCR097W	SDT1	P53078	280 aa		3.01	□□□□□ -1.93
HMRA1	YCR097W	SOL4	P53315	255 aa		3.01	□□□□□ -1.93
HMRA1	YCR097W	RSM28	Q03430	361 aa		3.01	□□□□□ -1.93
HMRA1	YCR097W	CDC45	Q08032	650 aa		3.01	□□□□□ -1.93
HMRA1	YCR097W	AYT1	Q12226	474 aa		3.01	□□□□□ -1.93
HMRA1	YCR097W	PTR2	P32901	601 aa		3	□□□□□ -1.93
HMRA1	YCR097W	SWP82	P43554	623 aa		3	□□□□□ -1.93
HMRA1	YCR097W	PEX14	P53112	341 aa		3	□□□□□ -1.93
HMRA1	YCR097W	RDR1	Q08904	546 aa		3	□□□□□ -1.93
HMRA1	YCR097W	MTC4	P38335	694 aa	Known RBP	2.99	□□□□□ -1.93
HMRA1	YCR097W	ARP1	P38696	384 aa		2.99	□□□□□ -1.93
HMRA1	YCR097W	YIL161W	P40449	235 aa	Known RBP	2.99	□□□□□ -1.93
HMRA1	YCR097W	YFR020W	P43600	232 aa		2.99	□□□□□ -1.93
HMRA1	YCR097W	YGL082W	P53155	381 aa		2.99	□□□□□ -1.93
HMRA1	YCR097W	ATG26	Q06321	1198 aa		2.99	□□□□□ -1.93
HMRA1	YCR097W	CSR1	Q06705	408 aa	Known RBP	2.99	□□□□□ -1.93
HMRA1	YCR097W	PDH1	Q12428	516 aa	Known RBP	2.99	□□□□□ -1.93
HMRA1	YCR097W	YCL021W-A	Q96VH3	125 aa		2.99	□□□□□ -1.93
HMRA1	YCR097W	PMR1	P13586	950 aa		2.98	□□□□□ -1.93
HMRA1	YCR097W	TYR1	P20049	452 aa		2.98	□□□□□ -1.93
HMRA1	YCR097W	PRS1	P32895	427 aa	Known RBP	2.98	□□□□□ -1.93
HMRA1	YCR097W	MHR1	Q06630	226 aa		2.98	□□□□□ -1.93
HMRA1	YCR097W	HEM2	P05373	342 aa		2.97	□□□□□ -1.93
HMRA1	YCR097W	SIP2	P34164	415 aa	Known RBP	2.97	□□□□□ -1.93
HMRA1	YCR097W	TIS11	P47977	285 aa		2.97	□□□□□ -1.93
HMRA1	YCR097W	BTN2	P53286	410 aa		2.97	□□□□□ -1.93
HMRA1	YCR097W	EIS1	Q05050	843 aa	Known RBP	2.97	□□□□□ -1.93
HMRA1	YCR097W	RPL20A	P0CX23	172 aa	Known RBP	2.96	□□□□□ -1.94
HMRA1	YCR097W	RPL20B	P0CX24	172 aa	Predicted RBP	2.96	□□□□□ -1.94
HMRA1	YCR097W	SPO16	P17122	198 aa		2.96	□□□□□ -1.94
HMRA1	YCR097W	MRC1	P25588	1096 aa		2.96	□□□□□ -1.94
HMRA1	YCR097W	YNK1	P36010	153 aa	Known RBP	2.96	□□□□□ -1.94
HMRA1	YCR097W	FSH1	P38777	243 aa	Known RBP	2.96	□□□□□ -1.94
HMRA1	YCR097W	ERR3	P42222	437 aa		2.96	□□□□□ -1.94
HMRA1	YCR097W	NNF2	P53253	936 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 40 ms