RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B ATP2P00830 511 aaKnown RBP1.86□□□□□ -2.11
HTL1YCR020W-B CLB2P24869 491 aa1.86□□□□□ -2.11
HTL1YCR020W-B AGA1P32323 725 aa1.86□□□□□ -2.11
HTL1YCR020W-B NUP120P35729 1037 aa1.86□□□□□ -2.11
HTL1YCR020W-B YFR020WP43600 232 aa1.86□□□□□ -2.11
HTL1YCR020W-B IKS1P47042 667 aa1.86□□□□□ -2.11
HTL1YCR020W-B NNF2P53253 936 aa1.86□□□□□ -2.11
HTL1YCR020W-B TDA7P53882 636 aaPredicted RBP1.86□□□□□ -2.11
HTL1YCR020W-B RSM28Q03430 361 aa1.86□□□□□ -2.11
HTL1YCR020W-B FMP45Q07651 309 aa1.86□□□□□ -2.11
HTL1YCR020W-B SST2P11972 698 aaKnown RBP1.85□□□□□ -2.11
HTL1YCR020W-B MCM4P30665 933 aaKnown RBP1.85□□□□□ -2.11
HTL1YCR020W-B ATS1P31386 333 aa1.85□□□□□ -2.11
HTL1YCR020W-B NTR2P36118 322 aaPredicted RBP1.85□□□□□ -2.11
HTL1YCR020W-B PAF1P38351 445 aa1.85□□□□□ -2.11
HTL1YCR020W-B FSH1P38777 243 aaKnown RBP1.85□□□□□ -2.11
HTL1YCR020W-B ECM10P39987 644 aa1.85□□□□□ -2.11
HTL1YCR020W-B RGI2P40188 164 aa1.85□□□□□ -2.11
HTL1YCR020W-B YPI1P43587 155 aa1.85□□□□□ -2.11
HTL1YCR020W-B IMA1P53051 589 aa1.85□□□□□ -2.11
HTL1YCR020W-B RDR1Q08904 546 aa1.85□□□□□ -2.11
HTL1YCR020W-B MPD2Q99316 277 aa1.85□□□□□ -2.11
HTL1YCR020W-B PIF1P07271 859 aa1.84□□□□□ -2.11
HTL1YCR020W-B BIK1P11709 440 aa1.84□□□□□ -2.11
HTL1YCR020W-B SPO16P17122 198 aa1.84□□□□□ -2.11
HTL1YCR020W-B RPS2P25443 254 aaKnown RBP1.84□□□□□ -2.11
HTL1YCR020W-B MRC1P25588 1096 aa1.84□□□□□ -2.11
HTL1YCR020W-B PHD1P36093 366 aa1.84□□□□□ -2.11
HTL1YCR020W-B AAP1P37898 856 aaKnown RBP1.84□□□□□ -2.11
HTL1YCR020W-B YER130CP39959 443 aa1.84□□□□□ -2.11
HTL1YCR020W-B FAF1P40546 346 aaPredicted RBP1.84□□□□□ -2.11
HTL1YCR020W-B YJL213WP40896 331 aa1.84□□□□□ -2.11
HTL1YCR020W-B SWP82P43554 623 aa1.84□□□□□ -2.11
HTL1YCR020W-B YFR016CP43597 1233 aaKnown RBP1.84□□□□□ -2.11
HTL1YCR020W-B GUF1P46943 645 aa1.84□□□□□ -2.11
HTL1YCR020W-B YDL186WP48568 277 aa1.84□□□□□ -2.11
HTL1YCR020W-B PKP2P53170 491 aa1.84□□□□□ -2.11
HTL1YCR020W-B YEH2Q07950 538 aa1.84□□□□□ -2.11
HTL1YCR020W-B YOL159CQ08300 171 aa1.84□□□□□ -2.11
HTL1YCR020W-B SET6Q12529 373 aa1.84□□□□□ -2.11
HTL1YCR020W-B RPL15AP05748 204 aaKnown RBP1.83□□□□□ -2.12
HTL1YCR020W-B MCK1P21965 375 aaKnown RBP1.83□□□□□ -2.12
HTL1YCR020W-B CLB4P24871 460 aa1.83□□□□□ -2.12
HTL1YCR020W-B ACH1P32316 526 aa1.83□□□□□ -2.12
HTL1YCR020W-B ESL2P36168 1195 aa1.83□□□□□ -2.12
HTL1YCR020W-B YBR138CP38277 524 aa1.83□□□□□ -2.12
HTL1YCR020W-B RRT2P38332 387 aa1.83□□□□□ -2.12
HTL1YCR020W-B RPH1P39956 796 aa1.83□□□□□ -2.12
HTL1YCR020W-B AXL1P40851 1208 aa1.83□□□□□ -2.12
HTL1YCR020W-B CPR6P53691 371 aaKnown RBP1.83□□□□□ -2.12
HTL1YCR020W-B TRS130Q03660 1102 aa1.83□□□□□ -2.12
HTL1YCR020W-B BSC6Q08280 497 aa1.83□□□□□ -2.12
HTL1YCR020W-B LOS1P33418 1100 aaPredicted RBP1.82□□□□□ -2.12
HTL1YCR020W-B GEX2P36173 615 aa1.82□□□□□ -2.12
HTL1YCR020W-B YBP1P38315 674 aa1.82□□□□□ -2.12
HTL1YCR020W-B PHO90P39535 881 aa1.82□□□□□ -2.12
HTL1YCR020W-B SPC72P39723 622 aa1.82□□□□□ -2.12
HTL1YCR020W-B VPS27P40343 622 aaKnown RBP1.82□□□□□ -2.12
HTL1YCR020W-B YJL132WP47014 750 aa1.82□□□□□ -2.12
HTL1YCR020W-B TGL2P54857 326 aa1.82□□□□□ -2.12
HTL1YCR020W-B DOS2P54858 310 aa1.82□□□□□ -2.12
HTL1YCR020W-B MSS11Q03825 758 aa1.82□□□□□ -2.12
HTL1YCR020W-B RBA50Q04418 439 aa1.82□□□□□ -2.12
HTL1YCR020W-B EIS1Q05050 843 aaKnown RBP1.82□□□□□ -2.12
HTL1YCR020W-B VAM6Q07468 1049 aa1.82□□□□□ -2.12
HTL1YCR020W-B TMA16Q08687 178 aa1.82□□□□□ -2.12
HTL1YCR020W-B LCB1P25045 558 aaKnown RBP1.81□□□□□ -2.12
HTL1YCR020W-B GAC1P28006 793 aa1.81□□□□□ -2.12
HTL1YCR020W-B NDC1P32500 655 aa1.81□□□□□ -2.12
HTL1YCR020W-B MIA40P36046 403 aa1.81□□□□□ -2.12
HTL1YCR020W-B YKL133CP36066 463 aa1.81□□□□□ -2.12
HTL1YCR020W-B SPC34P36131 295 aa1.81□□□□□ -2.12
HTL1YCR020W-B HIS6P40545 261 aa1.81□□□□□ -2.12
HTL1YCR020W-B RPR2P40571 144 aa1.81□□□□□ -2.12
HTL1YCR020W-B RTT101P47050 842 aa1.81□□□□□ -2.12
HTL1YCR020W-B TAN1P53072 289 aaPredicted RBP1.81□□□□□ -2.12
HTL1YCR020W-B YGL082WP53155 381 aa1.81□□□□□ -2.12
HTL1YCR020W-B RBG2P53295 368 aaKnown RBP1.81□□□□□ -2.12
HTL1YCR020W-B SOL4P53315 255 aa1.81□□□□□ -2.12
HTL1YCR020W-B ATG26Q06321 1198 aa1.81□□□□□ -2.12
HTL1YCR020W-B CSR1Q06705 408 aaKnown RBP1.81□□□□□ -2.12
HTL1YCR020W-B COX17Q12287 69 aa1.81□□□□□ -2.12
HTL1YCR020W-B PDH1Q12428 516 aaKnown RBP1.81□□□□□ -2.12
HTL1YCR020W-B MTF1P14908 341 aaKnown RBP1.8□□□□□ -2.12
HTL1YCR020W-B PTR2P32901 601 aa1.8□□□□□ -2.12
HTL1YCR020W-B YNK1P36010 153 aaKnown RBP1.8□□□□□ -2.12
HTL1YCR020W-B PUG1P40100 303 aa1.8□□□□□ -2.12
HTL1YCR020W-B ASE1P50275 885 aa1.8□□□□□ -2.12
HTL1YCR020W-B YGL242CP53066 181 aa1.8□□□□□ -2.12
HTL1YCR020W-B BRE1Q07457 700 aaKnown RBP1.8□□□□□ -2.12
HTL1YCR020W-B HXK2P04807 486 aaKnown RBP1.79□□□□□ -2.12
HTL1YCR020W-B SNF3P10870 884 aa1.79□□□□□ -2.12
HTL1YCR020W-B SEC62P21825 274 aa1.79□□□□□ -2.12
HTL1YCR020W-B SRB5P32585 307 aa1.79□□□□□ -2.12
HTL1YCR020W-B TFC3P34111 1160 aa1.79□□□□□ -2.12
HTL1YCR020W-B ANS1P38832 159 aa1.79□□□□□ -2.12
HTL1YCR020W-B COS10P52924 374 aa1.79□□□□□ -2.12
HTL1YCR020W-B COG1P53079 417 aa1.79□□□□□ -2.12
HTL1YCR020W-B HCR1Q05775 265 aaKnown RBP1.79□□□□□ -2.12
HTL1YCR020W-B ADE13Q05911 482 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms