RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	NAN1	Q02931	896 aa	Known RBP	4.63	□□□□□ -1.67
VHC1	YBR235W	YDR286C	Q05530	114 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	YDR278C	Q05612	105 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	REH1	Q06709	432 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	SPO75	Q07798	868 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	PHM7	Q12252	991 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	BI4	P03879	638 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	ADR1	P07248	1323 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	MET2	P08465	486 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	MET8	P15807	274 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	PRI2	P20457	528 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	KGD1	P20967	1014 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	CHL1	P22516	861 aa	Predicted RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	RAD14	P28519	371 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SPT14	P32363	452 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SCT1	P32784	759 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	URB1	P34241	1764 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	MTC2	P34246	357 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	YHR045W	P38775	560 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SPF1	P39986	1215 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	RRN7	P40992	514 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	NUP192	P47054	1683 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	RIM8	P53179	542 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	RSM27	P53305	110 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SOL4	P53315	255 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	TIF35	Q04067	274 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	PLM2	Q04383	521 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	MYO5	Q04439	1219 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	ATP14	Q12349	124 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	DCN1	Q12395	269 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	ATP6	P00854	259 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	CHS2	P14180	963 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	CTS1	P29029	562 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	RNP1	P32385	249 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	PEX2	P32800	271 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	VPS17	P32913	551 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	STV1	P37296	890 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	EDS1	P38073	919 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	KTR3	P38130	404 aa	Predicted RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	FUI1	P38196	639 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	PRP24	P49960	444 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	TPN1	P53099	579 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	TWF1	P53250	332 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	YGR127W	P53275	312 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SND1	Q04007	877 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	DPB4	Q04603	196 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	COQ9	Q05779	260 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	MCH5	Q08777	521 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SLF1	Q12034	447 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	YOR342C	Q12182	319 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	CBS2	P14905	389 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	CDC13	P32797	924 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	WHI3	P34761	661 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	YPK3	P38070	525 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	PCM1	P38628	557 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	GPB2	P39717	880 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SOK1	P40317	901 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	NUP82	P40368	713 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	PFK26	P40433	827 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	ASG1	P40467	964 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	SPO74	P45819	413 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	YGL036W	P53185	909 aa	Predicted RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	RBS1	Q05672	457 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	CYK3	Q07533	885 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	CUE5	Q08412	411 aa	Known RBP	4.62	□□□□□ -1.67
VHC1	YBR235W	SVS1	Q12254	260 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	STB3	Q12427	513 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	YOR093C	Q12275	1648 aa		4.62	□□□□□ -1.67
VHC1	YBR235W	TY1A-DR4	O74302	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	RPS18A	P0CX55	146 aa	Known RBP	4.61	□□□□□ -1.67
VHC1	YBR235W	RPS18B	P0CX56	146 aa	Predicted RBP	4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-A	P0CX57	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-PR1	P0CX58	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-OR	P0CX59	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-PR2	P0CX60	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-DR5	P0CX65	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-ER2	P0CX66	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-GR3	P0CX67	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-LR1	P0CX68	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-MR2	P0CX69	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	SAN1	P22470	610 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	SSE2	P32590	693 aa	Known RBP	4.61	□□□□□ -1.67
VHC1	YBR235W	YKL069W	P36088	180 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	BCH2	P36122	765 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	MRPL37	P36532	105 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	UBX7	P38349	436 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	PHM8	P40025	321 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	YRB2	P40517	327 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	AIP1	P46680	615 aa	Known RBP	4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-JR2	P47099	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	AIM24	P47127	394 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	IMA1	P53051	589 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	VPS62	P53285	467 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	YDR541C	Q03049	344 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	RSC9	Q03124	581 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-DR1	Q03856	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-ML1	Q04706	440 aa	Known RBP	4.61	□□□□□ -1.67
VHC1	YBR235W	CSC1	Q06538	782 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-BR	Q12217	440 aa		4.61	□□□□□ -1.67
VHC1	YBR235W	TY1A-NL2	Q12470	440 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms