RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 F8W031 263 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-229ENST00000641891 CCDC178Q5BJE1 867 aa19.33■□□□□ 0.68
PHGDH-229ENST00000641891 HEATR3Q7Z4Q2 680 aa19.33■□□□□ 0.68
PHGDH-229ENST00000641891 SH3RF1Q7Z6J0 888 aa19.33■□□□□ 0.68
PHGDH-229ENST00000641891 MLKLQ8NB16 471 aa19.33■□□□□ 0.68
PHGDH-229ENST00000641891 STAMQ92783 540 aa19.33■□□□□ 0.68
PHGDH-229ENST00000641891 INTS13Q9NVM9 706 aa19.33■□□□□ 0.68
PHGDH-229ENST00000641891 DAGLAQ9Y4D2 1042 aa19.33■□□□□ 0.68
PHGDH-229ENST00000641891 MYH1P12882 1939 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 PALM3A6NDB9 673 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-229ENST00000641891 CALML3P27482 149 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 GTF2F1P35269 517 aaKnown RBP eCLIP19.32■□□□□ 0.68
PHGDH-229ENST00000641891 NT5C2P49902 561 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 CCDC150Q8NCX0 1101 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 FAM163AQ96GL9 167 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-229ENST00000641891 NFE2L3Q9Y4A8 694 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 PLCG2P16885 1265 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 TRAPPC10P48553 1259 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 GNAQP50148 359 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 CERS3Q8IU89 383 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 SP8Q8IXZ3 490 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 TRIML1Q8N9V2 468 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 TBC1D22AQ8WUA7 517 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 MXD3Q9BW11 206 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 SH3GLB2Q9NR46 395 aa19.32■□□□□ 0.68
PHGDH-229ENST00000641891 M0R2N6 131 aa19.31■□□□□ 0.68
PHGDH-229ENST00000641891 STXBP3O00186 592 aa19.31■□□□□ 0.68
PHGDH-229ENST00000641891 SFPQP23246 707 aaKnown RBP eCLIP19.31■□□□□ 0.68
PHGDH-229ENST00000641891 PICALMQ13492 652 aa19.31■□□□□ 0.68
PHGDH-229ENST00000641891 CBFA2T2O43439 604 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 GOLGA8FQ08AF8 430 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 GOLGA8DPQ0D2H9 430 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 CCAR2Q8N163 923 aaKnown RBP19.3■□□□□ 0.68
PHGDH-229ENST00000641891 C4orf32Q8N8J7 132 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 NEDD1Q8NHV4 660 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 CEP95Q96GE4 821 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 ZNF287Q9HBT7 754 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 PCDHA6Q9UN73 950 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 ATP6V0A2Q9Y487 856 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 PCDHA8Q9Y5H6 950 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 KLRF2D3W0D1 207 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 CD44P16070 742 aaKnown RBP19.3■□□□□ 0.68
PHGDH-229ENST00000641891 DPYDQ12882 1025 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 HSP90AA2PQ14568 343 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-229ENST00000641891 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 COL23A1Q86Y22 540 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-229ENST00000641891 SLF2Q8IX21 1173 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 SMYD4Q8IYR2 804 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-229ENST00000641891 CERS5Q8N5B7 392 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 ENOX1Q8TC92 643 aaKnown RBP19.3■□□□□ 0.68
PHGDH-229ENST00000641891 DACH1Q9UI36 760 aa19.3■□□□□ 0.68
PHGDH-229ENST00000641891 FOCADQ5VW36 1801 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 ZNF18P17022 549 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 CDC25AP30304 524 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 E2F4Q16254 413 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 DOK7Q18PE1 504 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 VSTM4Q8IW00 320 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 SAMSN1Q9NSI8 373 aaKnown RBP19.29■□□□□ 0.68
PHGDH-229ENST00000641891 BARHL2Q9NY43 387 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 ZNF592Q92610 1267 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 BLZF1Q9H2G9 400 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 ADAMTSL1Q8N6G6 1762 aa19.29■□□□□ 0.68
PHGDH-229ENST00000641891 CCDC194A0A1B0GVG4 234 aa19.28■□□□□ 0.68
PHGDH-229ENST00000641891 RRP9O43818 475 aaKnown RBP19.28■□□□□ 0.68
PHGDH-229ENST00000641891 SRGNP10124 158 aa19.28■□□□□ 0.68
PHGDH-229ENST00000641891 INF2Q27J81 1249 aa19.28■□□□□ 0.68
PHGDH-229ENST00000641891 CEP135Q66GS9 1140 aa19.28■□□□□ 0.68
PHGDH-229ENST00000641891 E4F1Q66K89 784 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-229ENST00000641891 KLHL10Q6JEL2 608 aa19.28■□□□□ 0.68
PHGDH-229ENST00000641891 NYAP1Q6ZVC0 841 aa19.28■□□□□ 0.68
PHGDH-229ENST00000641891 MYO1BO43795 1136 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 STX17P56962 302 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 PDXDC2PQ6P474 469 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 HOMER1Q86YM7 354 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 MTRQ99707 1265 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 COA1Q9GZY4 146 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 DDX4Q9NQI0 724 aaKnown RBP19.27■□□□□ 0.68
PHGDH-229ENST00000641891 PARP1P09874 1014 aaKnown RBP19.27■□□□□ 0.68
PHGDH-229ENST00000641891 TMC4Q7Z404 712 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 DAGLBQ8NCG7 672 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 CCDC148Q8NFR7 591 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 CCDC34Q96HJ3 373 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 TMEM60Q9H2L4 133 aa19.27■□□□□ 0.68
PHGDH-229ENST00000641891 COL11A2P13942 1736 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-229ENST00000641891 TOP1P11387 765 aaKnown RBP19.26■□□□□ 0.67
PHGDH-229ENST00000641891 CDK11BP21127 795 aaKnown RBP19.26■□□□□ 0.67
PHGDH-229ENST00000641891 SCNN1DP51172 638 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 PTPN14Q15678 1187 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 ZNF710Q8N1W2 664 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 SPZ1Q9BXG8 430 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 VAT1LQ9HCJ6 419 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 USP17L5A8MUK1 530 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 CUL4BQ13620 913 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 IQUBQ8NA54 791 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 LZTS2Q9BRK4 669 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 ZC3H12CQ9C0D7 883 aaKnown RBP19.26■□□□□ 0.67
PHGDH-229ENST00000641891 TTF2Q9UNY4 1162 aaKnown RBP19.26■□□□□ 0.67
PHGDH-229ENST00000641891 NRXN2Q9P2S2 1712 aa19.26■□□□□ 0.67
PHGDH-229ENST00000641891 PP2D1A8MPX8 630 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms