RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 MMP14P50281 582 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 NDUFA8P51970 172 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 SCRN1Q12765 414 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 UBE3CQ15386 1083 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 GPR101Q96P66 508 aaPredicted RBP13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 BAIAP2L1Q9UHR4 511 aa13.35□□□□□ -0.27
RBFOX1-224ENST00000641259 A0A1B0GUA9 196 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 CDC25BP30305 580 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 CDC25CP30307 473 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 ALDH8A1Q9H2A2 487 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 EPB41L4AQ9HCS5 686 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 INCENPQ9NQS7 918 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 TACC3Q9Y6A5 838 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 PRKAB2O43741 272 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 APBA3O96018 575 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 IFT88Q13099 833 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 KRT32Q14532 448 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 CEP112Q8N8E3 955 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 FAM71BQ8TC56 605 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 KAT2BQ92831 832 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 POLRMTO00411 1230 aaKnown RBP13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 SERPINB2P05120 415 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 ELF1P32519 619 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 PDCLQ13371 301 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 STRBPQ96SI9 672 aaKnown RBP13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 JADE2Q9NQC1 790 aa13.34□□□□□ -0.27
RBFOX1-224ENST00000641259 PHLPP2Q6ZVD8 1323 aa13.33□□□□□ -0.27
RBFOX1-224ENST00000641259 SOWAHDA6NJG2 315 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 LCORLQ8N3X6 602 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 ZSCAN16Q9H4T2 348 aaPredicted RBP13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 MYH13Q9UKX3 1938 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 ARHGAP6O43182 974 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 MBD4O95243 580 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 MAP2K1Q02750 393 aaPredicted RBP13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 CCDC181Q5TID7 509 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 SMIM22K7EJ46 135 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 BACH1O14867 736 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 ATP8B1O43520 1251 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 TSR1Q2NL82 804 aaKnown RBP13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 SRGAP1Q7Z6B7 1085 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 COL23A1Q86Y22 540 aaPredicted RBP13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 EGFL6Q8IUX8 553 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 SGSM3Q96HU1 749 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 CAPS2Q9BXY5 557 aa13.33□□□□□ -0.28
RBFOX1-224ENST00000641259 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 POTEAQ6S8J7 498 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 SLC35F6Q8N357 371 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 CCDC82Q8N4S0 544 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 ANTXR2P58335 489 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 DHX32Q7L7V1 743 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 FBXO33Q7Z6M2 555 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 PNMA8AQ86V59 439 aaPredicted RBP13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 IQCA1Q86XH1 822 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 KAT14Q9H8E8 782 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 PPANQ9NQ55 473 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 PNOCQ13519 176 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 GRAPQ13588 217 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 GRAPLQ8TC17 118 aaPredicted RBP13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 GJB4Q9NTQ9 266 aa13.32□□□□□ -0.28
RBFOX1-224ENST00000641259 ZNF202O95125 648 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 IPO7O95373 1038 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 RXRBP28702 533 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 SYKP43405 635 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 MAP3K12Q12852 859 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 POTEDQ86YR6 584 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 CEP89Q96ST8 783 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 GGCXP38435 758 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 ZBTB10Q96DT7 871 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 POTEB2H3BUK9 544 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 PSMD2Q13200 908 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 SARM1Q6SZW1 724 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 FMNL3Q8IVF7 1028 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 AGXT2Q9BYV1 514 aa13.31□□□□□ -0.28
RBFOX1-224ENST00000641259 VWA3AA6NCI4 1184 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms