RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GAKO14976 1311 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 PALM3A6NDB9 673 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-211ENST00000641213 CYTH3O43739 400 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 SFPQP23246 707 aaKnown RBP eCLIP19.44■□□□□ 0.7
PHGDH-211ENST00000641213 MCM7P33993 719 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 AFMP43652 599 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 CFAP100Q494V2 611 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 TYW1BQ6NUM6 668 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 SLF2Q8IX21 1173 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 PROM2Q8N271 834 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 FAM205AQ6ZU69 1335 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 NRXN2Q9P2S2 1712 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 IL17AQ16552 155 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 SP8Q8IXZ3 490 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 CCAR2Q8N163 923 aaKnown RBP19.44■□□□□ 0.7
PHGDH-211ENST00000641213 ENOX1Q8TC92 643 aaKnown RBP19.44■□□□□ 0.7
PHGDH-211ENST00000641213 EYA3Q99504 573 aa19.44■□□□□ 0.7
PHGDH-211ENST00000641213 QSER1Q2KHR3 1735 aa19.43■□□□□ 0.7
PHGDH-211ENST00000641213 TMC4Q7Z404 712 aa19.43■□□□□ 0.7
PHGDH-211ENST00000641213 MED15Q96RN5 788 aa19.43■□□□□ 0.7
PHGDH-211ENST00000641213 MTMR7Q9Y216 660 aa19.43■□□□□ 0.7
PHGDH-211ENST00000641213 NFE2L3Q9Y4A8 694 aa19.43■□□□□ 0.7
PHGDH-211ENST00000641213 M0R2N6 131 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 PPEF1O14829 653 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-211ENST00000641213 ZNF18P17022 549 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 TXNRD1Q16881 649 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 WWC2Q6AWC2 1192 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 NYAP1Q6ZVC0 841 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 VSTM4Q8IW00 320 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 NEDD1Q8NHV4 660 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 TSC1Q92574 1164 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 DPYDQ12882 1025 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 TRMT44Q8IYL2 757 aaKnown RBP19.42■□□□□ 0.7
PHGDH-211ENST00000641213 C4orf32Q8N8J7 132 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 LZTS2Q9BRK4 669 aa19.42■□□□□ 0.7
PHGDH-211ENST00000641213 TMEM232C9JQI7 657 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 ERCC5P28715 1186 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-211ENST00000641213 CASP1P29466 404 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 GTF2IP78347 998 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 E2F4Q16254 413 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 HSP90AA4PQ58FG1 418 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 ARL6IP4Q66PJ3 421 aaKnown RBP19.41■□□□□ 0.7
PHGDH-211ENST00000641213 DAGLBQ8NCG7 672 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 RASGRP4Q8TDF6 673 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 INTS13Q9NVM9 706 aa19.41■□□□□ 0.7
PHGDH-211ENST00000641213 TRMT1Q9NXH9 659 aaKnown RBP19.41■□□□□ 0.7
PHGDH-211ENST00000641213 STXBP3O00186 592 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 GOLGA8HP0CJ92 632 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 CEP135Q66GS9 1140 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 RASGRP2Q7LDG7 609 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 CCDC148Q8NFR7 591 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 GSDMAQ96QA5 445 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 BARHL2Q9NY43 387 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 PCDHA6Q9UN73 950 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 ATP6V0A2Q9Y487 856 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 DAGLAQ9Y4D2 1042 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 PAXBP1Q9Y5B6 917 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 PCDHA8Q9Y5H6 950 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 KLRF2D3W0D1 207 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 RIMBP2O15034 1052 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 PTPN14Q15678 1187 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 CT47A1Q5JQC4 288 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-211ENST00000641213 GALNT17Q6IS24 598 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 HEATR3Q7Z4Q2 680 aa19.4■□□□□ 0.7
PHGDH-211ENST00000641213 COL11A2P13942 1736 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-211ENST00000641213 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.7
PHGDH-211ENST00000641213 CCDC194A0A1B0GVG4 234 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 KCNJ6P48051 423 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 E4F1Q66K89 784 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-211ENST00000641213 IQUBQ8NA54 791 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 SPZ1Q9BXG8 430 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 TOP1P11387 765 aaKnown RBP19.39■□□□□ 0.69
PHGDH-211ENST00000641213 CD44P16070 742 aaKnown RBP19.39■□□□□ 0.69
PHGDH-211ENST00000641213 CDK11BP21127 795 aaKnown RBP19.39■□□□□ 0.69
PHGDH-211ENST00000641213 PDXDC2PQ6P474 469 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 CEP95Q96GE4 821 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 PYM1Q9BRP8 204 aaKnown RBP19.39■□□□□ 0.69
PHGDH-211ENST00000641213 COA1Q9GZY4 146 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 PDCL3Q9H2J4 239 aa19.39■□□□□ 0.69
PHGDH-211ENST00000641213 SAMSN1Q9NSI8 373 aaKnown RBP19.39■□□□□ 0.69
PHGDH-211ENST00000641213 NRDCO43847 1150 aa19.38■□□□□ 0.69
PHGDH-211ENST00000641213 PARP1P09874 1014 aaKnown RBP19.38■□□□□ 0.69
PHGDH-211ENST00000641213 LONP1P36776 959 aaKnown RBP19.38■□□□□ 0.69
PHGDH-211ENST00000641213 PTPN21Q16825 1174 aa19.38■□□□□ 0.69
PHGDH-211ENST00000641213 CPVLQ9H3G5 476 aa19.38■□□□□ 0.69
PHGDH-211ENST00000641213 CTIFO43310 598 aaKnown RBP19.37■□□□□ 0.69
PHGDH-211ENST00000641213 CUL4BQ13620 913 aa19.37■□□□□ 0.69
PHGDH-211ENST00000641213 FAM177A1Q8N128 213 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-211ENST00000641213 STAMQ92783 540 aa19.37■□□□□ 0.69
PHGDH-211ENST00000641213 PSDA5PKW4 1024 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-211ENST00000641213 SRGNP10124 158 aa19.37■□□□□ 0.69
PHGDH-211ENST00000641213 NOVP48745 357 aa19.37■□□□□ 0.69
PHGDH-211ENST00000641213 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
PHGDH-211ENST00000641213 ZNF710Q8N1W2 664 aa19.37■□□□□ 0.69
PHGDH-211ENST00000641213 TMX1Q9H3N1 280 aa19.37■□□□□ 0.69
PHGDH-211ENST00000641213 PPP1R3GB7ZBB8 358 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 INF2Q27J81 1249 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 CERS5Q8N5B7 392 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 ZNF592Q92610 1267 aa19.36■□□□□ 0.69
PHGDH-211ENST00000641213 MAP7D2Q96T17 732 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms