RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 HLA-CQ95604 372 aa7.65□□□□□ -1.18
PRKCH-228ENST00000640011 NSUN4Q96CB9 384 aaKnown RBP7.65□□□□□ -1.18
PRKCH-228ENST00000640011 PAGR1Q9BTK6 254 aa7.65□□□□□ -1.18
PRKCH-228ENST00000640011 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
PRKCH-228ENST00000640011 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.18
PRKCH-228ENST00000640011 PORCNQ9H237 461 aa7.65□□□□□ -1.18
PRKCH-228ENST00000640011 PCDHB15Q9Y5E8 787 aa7.65□□□□□ -1.18
PRKCH-228ENST00000640011 PRUNE2Q8WUY3 3088 aa7.65□□□□□ -1.19
PRKCH-228ENST00000640011 PHIPQ8WWQ0 1821 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 STRNO43815 780 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 SLURP2P0DP57 97 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 TIMM10P62072 90 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 GRB14Q14449 540 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 SNX17Q15036 470 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 SHHQ15465 462 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 CCL14Q16627 93 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 ALDH1L2Q3SY69 923 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 GORABQ5T7V8 394 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 WDR78Q5VTH9 848 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 SLC39A5Q6ZMH5 540 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 SPATA5Q8NB90 893 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 MYLIPQ8WY64 445 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 C12orf42Q96LP6 360 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 PRDM5Q9NQX1 630 aaPredicted RBP7.64□□□□□ -1.19
PRKCH-228ENST00000640011 RAI14Q9P0K7 980 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 LRP2BPQ9P2M1 347 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 ATP11BQ9Y2G3 1177 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 TACC3Q9Y6A5 838 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 MYH13Q9UKX3 1938 aa7.64□□□□□ -1.19
PRKCH-228ENST00000640011 SEPT4O43236 478 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 HOXA2O43364 376 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 UQCRFS1P1P0C7P4 283 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 ADORA1P30542 326 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 PPP4CP60510 307 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 GUCA2AQ02747 115 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 QPCTQ16769 361 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 CCDC184Q52MB2 194 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 OLFML2BQ68BL8 750 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 DPP9Q86TI2 863 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 ATXN2LQ8WWM7 1075 aaKnown RBP7.63□□□□□ -1.19
PRKCH-228ENST00000640011 BADQ92934 168 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 RNPC3Q96LT9 517 aaKnown RBP7.63□□□□□ -1.19
PRKCH-228ENST00000640011 FEZ1Q99689 392 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 TTYH1Q9H313 450 aaPredicted RBP7.63□□□□□ -1.19
PRKCH-228ENST00000640011 HMG20BQ9P0W2 317 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 ZBTB21Q9ULJ3 1066 aa7.63□□□□□ -1.19
PRKCH-228ENST00000640011 FLT1P17948 1338 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 E9PSI1 815 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 ANP32CO43423 234 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 CYBAP13498 195 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 ARID4AP29374 1257 aaPredicted RBP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 RRP1BQ14684 758 aaKnown RBP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 CSPP1Q1MSJ5 1256 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 TUSC1Q2TAM9 212 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 NAA16Q6N069 864 aaPredicted RBP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 CCDC174Q6PII3 467 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 TMED8Q6PL24 325 aaPredicted RBP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 CATSPERGQ6ZRH7 1159 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 SH3RF3Q8TEJ3 882 aaPredicted RBP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 TGFBRAP1Q8WUH2 860 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 SSH1Q8WYL5 1049 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 NEUROD6Q96NK8 337 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 KIAA1683Q9H0B3 1180 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 PDLIM7Q9NR12 457 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 AATFQ9NY61 560 aaKnown RBP eCLIP7.62□□□□□ -1.19
PRKCH-228ENST00000640011 HOXC10Q9NYD6 342 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 NRBP1Q9UHY1 535 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 PCDHGC3Q9UN70 934 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 DOCK3Q8IZD9 2030 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 MYH2Q9UKX2 1941 aa7.62□□□□□ -1.19
PRKCH-228ENST00000640011 SRGAP3O43295 1099 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 GDF11O95390 407 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 CFHP08603 1231 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 GNAI3P08754 354 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 CLTBP09497 229 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 CT47B1P0C2W7 299 aaPredicted RBP7.61□□□□□ -1.19
PRKCH-228ENST00000640011 RAG1P15918 1043 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 CYP2C19P33261 490 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 TRIM60Q495X7 471 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 C9orf50Q5SZB4 431 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 GJC2Q5T442 439 aaPredicted RBP7.61□□□□□ -1.19
PRKCH-228ENST00000640011 PPP2R2DQ66LE6 453 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 TATDN1Q6P1N9 297 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 RNF180Q86T96 592 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 ABRAQ8N0Z2 381 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 MB21D1Q8N884 522 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 SHCBP1Q8NEM2 672 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 ZNF384Q8TF68 577 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 GAS2L1Q99501 681 aaPredicted RBP7.61□□□□□ -1.19
PRKCH-228ENST00000640011 API5Q9BZZ5 524 aaKnown RBP7.61□□□□□ -1.19
PRKCH-228ENST00000640011 DNAJC18Q9H819 358 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 FLRT1Q9NZU1 646 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 PA2G4Q9UQ80 394 aaKnown RBP7.61□□□□□ -1.19
PRKCH-228ENST00000640011 PLXNB2O15031 1838 aa7.61□□□□□ -1.19
PRKCH-228ENST00000640011 ZNF521Q96K83 1311 aa7.6□□□□□ -1.19
PRKCH-228ENST00000640011 PEX10O60683 326 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms