RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-229ENST00000639809 RIOX2Q8IUF8 465 aa18.98■□□□□ 0.63
SPIN3-229ENST00000639809 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
SPIN3-229ENST00000639809 ARPP21Q9UBL0 812 aaPredicted RBP18.98■□□□□ 0.63
SPIN3-229ENST00000639809 DNAH12Q6ZR08 3092 aa18.98■□□□□ 0.63
SPIN3-229ENST00000639809 POTEB2H3BUK9 544 aa18.97■□□□□ 0.63
SPIN3-229ENST00000639809 EEF2P13639 858 aaKnown RBP18.97■□□□□ 0.63
SPIN3-229ENST00000639809 TMEM132BQ14DG7 1078 aa18.97■□□□□ 0.63
SPIN3-229ENST00000639809 ATP11BQ9Y2G3 1177 aa18.97■□□□□ 0.63
SPIN3-229ENST00000639809 SLC4A4Q9Y6R1 1079 aa18.97■□□□□ 0.63
SPIN3-229ENST00000639809 ROBO3Q96MS0 1386 aa18.96■□□□□ 0.63
SPIN3-229ENST00000639809 KCTD2Q14681 263 aa18.96■□□□□ 0.63
SPIN3-229ENST00000639809 LRRC41Q15345 812 aa18.96■□□□□ 0.63
SPIN3-229ENST00000639809 GIMAP6Q6P9H5 292 aa18.96■□□□□ 0.63
SPIN3-229ENST00000639809 CTR9Q6PD62 1173 aa18.96■□□□□ 0.63
SPIN3-229ENST00000639809 MSL3Q8N5Y2 521 aaKnown RBP18.96■□□□□ 0.63
SPIN3-229ENST00000639809 MMP19Q99542 508 aa18.96■□□□□ 0.63
SPIN3-229ENST00000639809 PPP1R9AQ9ULJ8 1098 aa18.96■□□□□ 0.63
SPIN3-229ENST00000639809 VWA5AO00534 786 aa18.95■□□□□ 0.62
SPIN3-229ENST00000639809 RARBP10826 455 aa18.95■□□□□ 0.62
SPIN3-229ENST00000639809 STAT3P40763 770 aa18.95■□□□□ 0.62
SPIN3-229ENST00000639809 SBK1Q52WX2 424 aa18.95■□□□□ 0.62
SPIN3-229ENST00000639809 CLEC10AQ8IUN9 316 aa18.95■□□□□ 0.62
SPIN3-229ENST00000639809 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
SPIN3-229ENST00000639809 RNF180Q86T96 592 aa18.94■□□□□ 0.62
SPIN3-229ENST00000639809 TINF2Q9BSI4 451 aa18.94■□□□□ 0.62
SPIN3-229ENST00000639809 PHF24Q9UPV7 400 aa18.94■□□□□ 0.62
SPIN3-229ENST00000639809 PARP14Q460N5 1801 aa18.94■□□□□ 0.62
SPIN3-229ENST00000639809 MYH7P12883 1935 aa18.94■□□□□ 0.62
SPIN3-229ENST00000639809 A0A0C4DFX4 3053 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 CYP2D7A0A087X1C5 515 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 ADCYAP1R1P41586 468 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 ZNF792Q3KQV3 632 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 SLFNL1Q499Z3 407 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 FAM47AQ5JRC9 791 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 PUS7LQ9H0K6 701 aaKnown RBP18.93■□□□□ 0.62
SPIN3-229ENST00000639809 BCL11AQ9H165 835 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 ZNF287Q9HBT7 754 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 XPNPEP3Q9NQH7 507 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 NYAP2Q9P242 653 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 ZNF214Q9UL59 606 aaPredicted RBP18.93■□□□□ 0.62
SPIN3-229ENST00000639809 SYNPO2Q9UMS6 1093 aa18.93■□□□□ 0.62
SPIN3-229ENST00000639809 TRIM60Q495X7 471 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 PRAMEF19Q5SWL8 479 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 ZNF697Q5TEC3 545 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 ANO1Q5XXA6 986 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 SAMD1Q6SPF0 538 aaPredicted RBP18.92■□□□□ 0.62
SPIN3-229ENST00000639809 STRBPQ96SI9 672 aaKnown RBP18.92■□□□□ 0.62
SPIN3-229ENST00000639809 TEX13BQ9BXU2 312 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 ECHDC1Q9NTX5 307 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 FBXO28Q9NVF7 368 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 RCAN3Q9UKA8 241 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 CNPY2Q9Y2B0 182 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 TACC3Q9Y6A5 838 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 LTBP2Q14767 1821 aa18.92■□□□□ 0.62
SPIN3-229ENST00000639809 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
SPIN3-229ENST00000639809 ZFYP08048 801 aaPredicted RBP18.91■□□□□ 0.62
SPIN3-229ENST00000639809 AKR1A1P14550 325 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 GNAT2P19087 354 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 LRRFIP1Q32MZ4 808 aaKnown RBP18.91■□□□□ 0.62
SPIN3-229ENST00000639809 FAM83BQ5T0W9 1011 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 KBTBD3Q8NAB2 608 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 REPS2Q8NFH8 660 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 SLF1Q9BQI6 1058 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 TSEN34Q9BSV6 310 aaKnown RBP18.91■□□□□ 0.62
SPIN3-229ENST00000639809 MKNK2Q9HBH9 465 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 PRDM5Q9NQX1 630 aaPredicted RBP18.91■□□□□ 0.62
SPIN3-229ENST00000639809 PDLIM7Q9NR12 457 aa18.91■□□□□ 0.62
SPIN3-229ENST00000639809 ZNFX1Q9P2E3 1918 aaKnown RBP18.9■□□□□ 0.62
SPIN3-229ENST00000639809 ATP2A1O14983 1001 aa18.9■□□□□ 0.62
SPIN3-229ENST00000639809 SMAD3P84022 425 aaKnown RBP18.9■□□□□ 0.62
SPIN3-229ENST00000639809 PRPF38AQ8NAV1 312 aaKnown RBP18.9■□□□□ 0.62
SPIN3-229ENST00000639809 APPBP2Q92624 585 aa18.9■□□□□ 0.62
SPIN3-229ENST00000639809 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
SPIN3-229ENST00000639809 SYNGAP1Q96PV0 1343 aa18.9■□□□□ 0.62
SPIN3-229ENST00000639809 COL11A1P12107 1806 aaPredicted RBP18.89■□□□□ 0.61
SPIN3-229ENST00000639809 GSG1L2A8MUP6 293 aa18.89■□□□□ 0.61
SPIN3-229ENST00000639809 SMIM22K7EJ46 135 aa18.89■□□□□ 0.61
SPIN3-229ENST00000639809 RAD21O60216 631 aa18.89■□□□□ 0.61
SPIN3-229ENST00000639809 PGK2P07205 417 aa18.89■□□□□ 0.61
SPIN3-229ENST00000639809 ZNF865P0CJ78 1059 aaPredicted RBP18.89■□□□□ 0.61
SPIN3-229ENST00000639809 RASA1P20936 1047 aa18.89■□□□□ 0.61
SPIN3-229ENST00000639809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.89■□□□□ 0.61
SPIN3-229ENST00000639809 ZNF467Q7Z7K2 595 aaPredicted RBP18.89■□□□□ 0.61
SPIN3-229ENST00000639809 BADQ92934 168 aa18.89■□□□□ 0.61
SPIN3-229ENST00000639809 GREB1LQ9C091 1923 aaPredicted RBP18.89■□□□□ 0.61
SPIN3-229ENST00000639809 F5H6K3 240 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 CHGBP05060 677 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 CLTBP09497 229 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 TLE2Q04725 743 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 KLRC3Q07444 240 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 SHHQ15465 462 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 MAMDC4Q6UXC1 1216 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 NUP133Q8WUM0 1156 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 FERMT2Q96AC1 680 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 TOX2Q96NM4 488 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 GUCD1Q96NT3 240 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 CUL9Q8IWT3 2517 aa18.88■□□□□ 0.61
SPIN3-229ENST00000639809 TRIM43BA6NCK2 446 aa18.87■□□□□ 0.61
SPIN3-229ENST00000639809 MOXD2PA6NHM9 499 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms