RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 CLRN2A0PK11 232 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 TCP10L2B9ZVM9 353 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 GRIN3BO60391 1043 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 DEXIO95424 95 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 BAG4O95429 457 aaKnown RBP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 TTLL1O95922 423 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 CLCN6P51797 869 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 CACNB3P54284 484 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 GNL2Q13823 731 aaKnown RBP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 SAFBQ15424 915 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 CERKLQ49MI3 558 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 CALR3Q96L12 384 aaKnown RBP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 RNF26Q9BY78 433 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 MTMR6Q9Y217 621 aa12.3□□□□□ -0.44
PRAMEF13-202ENST00000638454 WNT10BO00744 389 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 RXRAP19793 462 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 ADD1P35611 737 aaKnown RBP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 TROAPQ12815 778 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 PKP1Q13835 747 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 ATL3Q6DD88 541 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 TMEM179Q6ZVK1 233 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 RAB11FIP4Q86YS3 637 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 APOBEC3FQ8IUX4 373 aaKnown RBP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 ALG1Q9BT22 464 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 SLC26A6Q9BXS9 759 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
PRAMEF13-202ENST00000638454 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 SMIM22K7EJ46 135 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 NMT2O60551 498 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 PARP1P09874 1014 aaKnown RBP12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 CDC27P30260 824 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 SHMT1P34896 483 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 ABL2P42684 1182 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 KRT85P78386 507 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 GPR162Q16538 588 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 MCTP1Q6DN14 999 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 SPIRE2Q8WWL2 714 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 ZBED3Q96IU2 234 aaPredicted RBP12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 BRMS1Q9HCU9 246 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 IL17RBQ9NRM6 502 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 MTMR4Q9NYA4 1195 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 SYNPO2Q9UMS6 1093 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 PCDHAC2Q9Y5I4 1007 aa12.28□□□□□ -0.44
PRAMEF13-202ENST00000638454 DDTLA6NHG4 134 aaPredicted RBP12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 PRPF3O43395 683 aaKnown RBP12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 EVX2Q03828 476 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 GRM4Q14833 912 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 ABCB5Q2M3G0 1257 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 DCAF15Q66K64 600 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 RCSD1Q6JBY9 416 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 TATDN1Q6P1N9 297 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 TMTC3Q6ZXV5 915 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 BRAPQ7Z569 592 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 FBXO18Q8NFZ0 1043 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 GLMNQ92990 594 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 ZNF396Q96N95 335 aaPredicted RBP12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 ZNF541Q9H0D2 1346 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 SH2D4AQ9H788 454 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 GINM1Q9NU53 330 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 CFAP45Q9UL16 551 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 MTMR7Q9Y216 660 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 ZDHHC9Q9Y397 364 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
PRAMEF13-202ENST00000638454 AKR1B1P15121 316 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 SMARCA1P28370 1054 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 NTRK3Q16288 839 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 ASPRV1Q53RT3 343 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 C6orf132Q5T0Z8 1188 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 PHKBQ93100 1093 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 SCAND2PQ9GZW5 306 aaPredicted RBP12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 NYAP2Q9P242 653 aa12.26□□□□□ -0.45
PRAMEF13-202ENST00000638454 MBD3O95983 291 aa12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 FDPSP14324 419 aaKnown RBP12.25□□□□□ -0.45
PRAMEF13-202ENST00000638454 NOVP48745 357 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms