RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 ZNF18P17022 549 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 CDK8P49336 464 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 FMR1Q06787 632 aaKnown RBP eCLIP21.07■□□□□ 0.96
CTSD-212ENST00000637815 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 NYAP1Q6ZVC0 841 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 PAGE5Q96GU1 130 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 VWA3AA6NCI4 1184 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 ZNF827Q17R98 1081 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 ARL6IP4Q66PJ3 421 aaKnown RBP21.07■□□□□ 0.96
CTSD-212ENST00000637815 VSTM4Q8IW00 320 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 CCAR2Q8N163 923 aaKnown RBP21.07■□□□□ 0.96
CTSD-212ENST00000637815 DAGLBQ8NCG7 672 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 GPKOWQ92917 476 aaPredicted RBP eCLIP21.07■□□□□ 0.96
CTSD-212ENST00000637815 LZTS2Q9BRK4 669 aa21.07■□□□□ 0.96
CTSD-212ENST00000637815 CYTH3O43739 400 aa21.06■□□□□ 0.96
CTSD-212ENST00000637815 TRIM37O94972 964 aa21.06■□□□□ 0.96
CTSD-212ENST00000637815 ERCC5P28715 1186 aaPredicted RBP21.06■□□□□ 0.96
CTSD-212ENST00000637815 RBM10P98175 930 aaKnown RBP21.06■□□□□ 0.96
CTSD-212ENST00000637815 CFAP100Q494V2 611 aa21.06■□□□□ 0.96
CTSD-212ENST00000637815 GALNT17Q6IS24 598 aa21.06■□□□□ 0.96
CTSD-212ENST00000637815 KRT27Q7Z3Y8 459 aa21.06■□□□□ 0.96
CTSD-212ENST00000637815 SP8Q8IXZ3 490 aa21.06■□□□□ 0.96
CTSD-212ENST00000637815 NEDD1Q8NHV4 660 aa21.06■□□□□ 0.96
CTSD-212ENST00000637815 HMGB2P26583 209 aaKnown RBP21.05■□□□□ 0.96
CTSD-212ENST00000637815 DPYDQ12882 1025 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 E2F4Q16254 413 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 TYW1BQ6NUM6 668 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 CCDC148Q8NFR7 591 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 EYA3Q99504 573 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 PYM1Q9BRP8 204 aaKnown RBP21.05■□□□□ 0.96
CTSD-212ENST00000637815 STX8Q9UNK0 236 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 NFE2L3Q9Y4A8 694 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 PAXBP1Q9Y5B6 917 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 MCM7P33993 719 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 C4orf32Q8N8J7 132 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 GSDMAQ96QA5 445 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 MED15Q96RN5 788 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 BARHL2Q9NY43 387 aa21.05■□□□□ 0.96
CTSD-212ENST00000637815 C6orf229H3BNL8 230 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 PPEF1O14829 653 aaPredicted RBP21.04■□□□□ 0.96
CTSD-212ENST00000637815 IL17AQ16552 155 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 WWC2Q6AWC2 1192 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 MAP7D2Q96T17 732 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 SPZ1Q9BXG8 430 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 INTS13Q9NVM9 706 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 STXBP3O00186 592 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 CTIFO43310 598 aaKnown RBP21.04■□□□□ 0.96
CTSD-212ENST00000637815 AFMP43652 599 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 NOVP48745 357 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 PROM2Q8N271 834 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 PDCL3Q9H2J4 239 aa21.04■□□□□ 0.96
CTSD-212ENST00000637815 NRDCO43847 1150 aa21.03■□□□□ 0.96
CTSD-212ENST00000637815 TXNRD1Q16881 649 aa21.03■□□□□ 0.96
CTSD-212ENST00000637815 CEP135Q66GS9 1140 aa21.03■□□□□ 0.96
CTSD-212ENST00000637815 IQUBQ8NA54 791 aa21.03■□□□□ 0.96
CTSD-212ENST00000637815 SUGT1Q9Y2Z0 365 aa21.03■□□□□ 0.96
CTSD-212ENST00000637815 ATP6V0A2Q9Y487 856 aa21.03■□□□□ 0.96
CTSD-212ENST00000637815 PLIN4Q96Q06 1357 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 PSDA5PKW4 1024 aaPredicted RBP21.02■□□□□ 0.96
CTSD-212ENST00000637815 TMEM232C9JQI7 657 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 LONP1P36776 959 aaKnown RBP21.02■□□□□ 0.96
CTSD-212ENST00000637815 PTPN14Q15678 1187 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 E4F1Q66K89 784 aaPredicted RBP21.02■□□□□ 0.96
CTSD-212ENST00000637815 MTERF4Q7Z6M4 381 aaKnown RBP21.02■□□□□ 0.96
CTSD-212ENST00000637815 COA1Q9GZY4 146 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 PCDHA6Q9UN73 950 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 DAGLAQ9Y4D2 1042 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 PCDHA8Q9Y5H6 950 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 COL11A2P13942 1736 aaPredicted RBP21.02■□□□□ 0.96
CTSD-212ENST00000637815 KLRF2D3W0D1 207 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 CUL4BQ13620 913 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 PDXDC2PQ6P474 469 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 TRMT44Q8IYL2 757 aaKnown RBP21.02■□□□□ 0.96
CTSD-212ENST00000637815 CCDC112Q8NEF3 446 aa21.02■□□□□ 0.96
CTSD-212ENST00000637815 TOP1P11387 765 aaKnown RBP21.01■□□□□ 0.95
CTSD-212ENST00000637815 SMARCA1P28370 1054 aa21.01■□□□□ 0.95
CTSD-212ENST00000637815 HEATR3Q7Z4Q2 680 aa21.01■□□□□ 0.95
CTSD-212ENST00000637815 TMX1Q9H3N1 280 aa21.01■□□□□ 0.95
CTSD-212ENST00000637815 CCDC194A0A1B0GVG4 234 aa21■□□□□ 0.95
CTSD-212ENST00000637815 GTF2IP78347 998 aa21■□□□□ 0.95
CTSD-212ENST00000637815 RASGRP4Q8TDF6 673 aa21■□□□□ 0.95
CTSD-212ENST00000637815 TRMT1Q9NXH9 659 aaKnown RBP21■□□□□ 0.95
CTSD-212ENST00000637815 KIF2AO00139 706 aaPredicted RBP21■□□□□ 0.95
CTSD-212ENST00000637815 PARP1P09874 1014 aaKnown RBP21■□□□□ 0.95
CTSD-212ENST00000637815 CASP1P29466 404 aa21■□□□□ 0.95
CTSD-212ENST00000637815 TBX2Q13207 712 aaPredicted RBP21■□□□□ 0.95
CTSD-212ENST00000637815 TSC1Q92574 1164 aa21■□□□□ 0.95
CTSD-212ENST00000637815 CEP95Q96GE4 821 aa21■□□□□ 0.95
CTSD-212ENST00000637815 CD44P16070 742 aaKnown RBP20.99■□□□□ 0.95
CTSD-212ENST00000637815 ZNF710Q8N1W2 664 aa20.99■□□□□ 0.95
CTSD-212ENST00000637815 ZMYND12Q9H0C1 365 aa20.99■□□□□ 0.95
CTSD-212ENST00000637815 GOLGA8HP0CJ92 632 aa20.99■□□□□ 0.95
CTSD-212ENST00000637815 SRGNP10124 158 aa20.99■□□□□ 0.95
CTSD-212ENST00000637815 CDK11BP21127 795 aaKnown RBP20.99■□□□□ 0.95
CTSD-212ENST00000637815 SPATA1Q5VX52 437 aa20.99■□□□□ 0.95
CTSD-212ENST00000637815 SAMSN1Q9NSI8 373 aaKnown RBP20.99■□□□□ 0.95
CTSD-212ENST00000637815 MTMR7Q9Y216 660 aa20.99■□□□□ 0.95
CTSD-212ENST00000637815 SYNRGQ9UMZ2 1314 aa20.98■□□□□ 0.95
CTSD-212ENST00000637815 ADAMTSL1Q8N6G6 1762 aa20.98■□□□□ 0.95
CTSD-212ENST00000637815 PPP1R3GB7ZBB8 358 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms