RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 GUCD1Q96NT3 240 aa10.6□□□□□ -0.71
CLN8-214ENST00000637594 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
CLN8-214ENST00000637594 TRIM43BA6NCK2 446 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 SMIM22K7EJ46 135 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 STAT3P40763 770 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 PLS1Q14651 629 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 SHHQ15465 462 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 SBK1Q52WX2 424 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 GIMAP6Q6P9H5 292 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 AMOTL1Q8IY63 956 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 TRIM43Q96BQ3 446 aaPredicted RBP10.59□□□□□ -0.71
CLN8-214ENST00000637594 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 TINF2Q9BSI4 451 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
CLN8-214ENST00000637594 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLN8-214ENST00000637594 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 ZNF214Q9UL59 606 aaPredicted RBP10.59□□□□□ -0.71
CLN8-214ENST00000637594 PPP1R9AQ9ULJ8 1098 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 ATP11BQ9Y2G3 1177 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 TACC3Q9Y6A5 838 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 DNAH12Q6ZR08 3092 aa10.59□□□□□ -0.71
CLN8-214ENST00000637594 ROBO3Q96MS0 1386 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 CYP2D7A0A087X1C5 515 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 APBB1O00213 710 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 ATP2A1O14983 1001 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 ZNF865P0CJ78 1059 aaPredicted RBP10.58□□□□□ -0.72
CLN8-214ENST00000637594 SMAD3P84022 425 aaKnown RBP10.58□□□□□ -0.72
CLN8-214ENST00000637594 KCTD2Q14681 263 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 TRIM60Q495X7 471 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 MAMDC4Q6UXC1 1216 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLN8-214ENST00000637594 RNF180Q86T96 592 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 BADQ92934 168 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 MKL1Q969V6 931 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 TOX2Q96NM4 488 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 STRBPQ96SI9 672 aaKnown RBP10.58□□□□□ -0.72
CLN8-214ENST00000637594 MMP19Q99542 508 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 PUS7LQ9H0K6 701 aaKnown RBP10.58□□□□□ -0.72
CLN8-214ENST00000637594 SEMA6BQ9H3T3 888 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 PDLIM7Q9NR12 457 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 NYAP2Q9P242 653 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 SLC4A4Q9Y6R1 1079 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 A0A0C4DFX4 3053 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 A0A0G2JMZ2 1700 aa10.58□□□□□ -0.72
CLN8-214ENST00000637594 FRMPD3Q5JV73 1810 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 DNAJC25-GNG10A0A024R161 153 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 KIAA0355O15063 1070 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 RARBP10826 455 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 TLE2Q04725 743 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 FAM47AQ5JRC9 791 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 ANO1Q5XXA6 986 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 ANKRD33Q7Z3H0 272 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 ZNF467Q7Z7K2 595 aaPredicted RBP10.57□□□□□ -0.72
CLN8-214ENST00000637594 CLEC10AQ8IUN9 316 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 LRRCC1Q9C099 1032 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 XPNPEP3Q9NQH7 507 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 FBXO28Q9NVF7 368 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 ARPP21Q9UBL0 812 aaPredicted RBP10.57□□□□□ -0.72
CLN8-214ENST00000637594 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
CLN8-214ENST00000637594 GSG1L2A8MUP6 293 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 F5H6K3 240 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 CHGBP05060 677 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 PGK2P07205 417 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 AKR1A1P14550 325 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 KLRC3Q07444 240 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 C9orf50Q5SZB4 431 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 FAM83BQ5T0W9 1011 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 ZNF697Q5TEC3 545 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 CCSAPQ6IQ19 270 aaPredicted RBP10.56□□□□□ -0.72
CLN8-214ENST00000637594 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
CLN8-214ENST00000637594 KLHDC9Q8NEP7 349 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 CDX2Q99626 313 aaPredicted RBP10.56□□□□□ -0.72
CLN8-214ENST00000637594 SYNGAP1Q96PV0 1343 aa10.56□□□□□ -0.72
CLN8-214ENST00000637594 NAV1Q8NEY1 1877 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 TMEM265A0A087WTH1 108 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 IGKV6D-41A0A0C4DH26 115 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 MOXD2PA6NHM9 499 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 ADAMTS4O75173 837 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 SNAI1O95863 264 aaPredicted RBP10.55□□□□□ -0.72
CLN8-214ENST00000637594 CLTBP09497 229 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 TAL1P17542 331 aaPredicted RBP10.55□□□□□ -0.72
CLN8-214ENST00000637594 RASA1P20936 1047 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 ITGB8P26012 769 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 NKX3-2P78367 333 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLN8-214ENST00000637594 NUP133Q8WUM0 1156 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 FERMT2Q96AC1 680 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 SLF1Q9BQI6 1058 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 ECHDC1Q9NTX5 307 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 FAM184BQ9ULE4 1060 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 CNPY2Q9Y2B0 182 aa10.55□□□□□ -0.72
CLN8-214ENST00000637594 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
CLN8-214ENST00000637594 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
CLN8-214ENST00000637594 DUSP11O75319 330 aaKnown RBP10.54□□□□□ -0.72
CLN8-214ENST00000637594 PGK1P00558 417 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms