RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 OTUD7AQ8TE49 926 aaPredicted RBP27.24■■□□□ 1.95
CHRNA7-229ENST00000637552 ZNF287Q9HBT7 754 aa27.24■■□□□ 1.95
CHRNA7-229ENST00000637552 DDX20Q9UHI6 824 aaKnown RBP27.24■■□□□ 1.95
CHRNA7-229ENST00000637552 COL11A1P12107 1806 aaPredicted RBP27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 MX1P20591 662 aa27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 FAM83BQ5T0W9 1011 aa27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 OLFML2BQ68BL8 750 aa27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 NACAP1Q9BZK3 213 aa27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 FBXO28Q9NVF7 368 aa27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 ZMYND8Q9ULU4 1186 aaPredicted RBP27.23■■□□□ 1.95
CHRNA7-229ENST00000637552 SLC25A27O95847 323 aa27.22■■□□□ 1.95
CHRNA7-229ENST00000637552 COL6A1P12109 1028 aa27.22■■□□□ 1.95
CHRNA7-229ENST00000637552 TMEM132BQ14DG7 1078 aa27.22■■□□□ 1.95
CHRNA7-229ENST00000637552 ABRAQ8N0Z2 381 aa27.22■■□□□ 1.95
CHRNA7-229ENST00000637552 STAP2Q9UGK3 403 aa27.22■■□□□ 1.95
CHRNA7-229ENST00000637552 PPP1R9AQ9ULJ8 1098 aa27.22■■□□□ 1.95
CHRNA7-229ENST00000637552 FCER1AP12319 257 aa27.21■■□□□ 1.95
CHRNA7-229ENST00000637552 IFNL3Q8IZI9 196 aa27.21■■□□□ 1.95
CHRNA7-229ENST00000637552 ZNF444Q8N0Y2 327 aaPredicted RBP27.21■■□□□ 1.95
CHRNA7-229ENST00000637552 NYAP2Q9P242 653 aa27.21■■□□□ 1.95
CHRNA7-229ENST00000637552 A0A1W2PPC1 479 aa27.2■■□□□ 1.94
CHRNA7-229ENST00000637552 PATL2C9JE40 543 aaKnown RBP27.2■■□□□ 1.94
CHRNA7-229ENST00000637552 COBLO75128 1261 aa27.2■■□□□ 1.94
CHRNA7-229ENST00000637552 CYBAP13498 195 aa27.2■■□□□ 1.94
CHRNA7-229ENST00000637552 CRBNQ96SW2 442 aa27.2■■□□□ 1.94
CHRNA7-229ENST00000637552 ADAMTS5Q9UNA0 930 aa27.2■■□□□ 1.94
CHRNA7-229ENST00000637552 VWA5AO00534 786 aa27.19■■□□□ 1.94
CHRNA7-229ENST00000637552 PRDM1O75626 825 aa27.19■■□□□ 1.94
CHRNA7-229ENST00000637552 TRPV1Q8NER1 839 aa27.19■■□□□ 1.94
CHRNA7-229ENST00000637552 SEC62Q99442 399 aaKnown RBP27.19■■□□□ 1.94
CHRNA7-229ENST00000637552 MYH4Q9Y623 1939 aa27.19■■□□□ 1.94
CHRNA7-229ENST00000637552 SZT2Q5T011 3432 aa27.19■■□□□ 1.94
CHRNA7-229ENST00000637552 IGHA2P01877 340 aa27.18■■□□□ 1.94
CHRNA7-229ENST00000637552 SYN1P17600 705 aa27.18■■□□□ 1.94
CHRNA7-229ENST00000637552 STAT3P40763 770 aa27.18■■□□□ 1.94
CHRNA7-229ENST00000637552 RIOX2Q8IUF8 465 aa27.18■■□□□ 1.94
CHRNA7-229ENST00000637552 MMP19Q99542 508 aa27.18■■□□□ 1.94
CHRNA7-229ENST00000637552 NUP88Q99567 741 aaPredicted RBP27.18■■□□□ 1.94
CHRNA7-229ENST00000637552 ZNFX1Q9P2E3 1918 aaKnown RBP27.18■■□□□ 1.94
CHRNA7-229ENST00000637552 F5H6K3 240 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 COPB2P35606 906 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 KLRC3Q07444 240 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 ZMYM1Q5SVZ6 1142 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 ANKRD45Q5TZF3 282 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 SLF1Q9BQI6 1058 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 NAPBQ9H115 298 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 CLIP2Q9UDT6 1046 aa27.17■■□□□ 1.94
CHRNA7-229ENST00000637552 NDUFB10O96000 172 aa27.16■■□□□ 1.94
CHRNA7-229ENST00000637552 SLC3A2P08195 630 aaKnown RBP27.16■■□□□ 1.94
CHRNA7-229ENST00000637552 PDE4BQ07343 736 aa27.16■■□□□ 1.94
CHRNA7-229ENST00000637552 KCTD2Q14681 263 aa27.16■■□□□ 1.94
CHRNA7-229ENST00000637552 MAML3Q96JK9 1138 aa27.16■■□□□ 1.94
CHRNA7-229ENST00000637552 IGKV6D-41A0A0C4DH26 115 aa27.15■■□□□ 1.94
CHRNA7-229ENST00000637552 LRRC26Q2I0M4 334 aa27.15■■□□□ 1.94
CHRNA7-229ENST00000637552 CEP95Q96GE4 821 aa27.15■■□□□ 1.94
CHRNA7-229ENST00000637552 GDF15Q99988 308 aa27.15■■□□□ 1.94
CHRNA7-229ENST00000637552 SENP6Q9GZR1 1112 aaPredicted RBP27.15■■□□□ 1.94
CHRNA7-229ENST00000637552 ZNF214Q9UL59 606 aaPredicted RBP27.15■■□□□ 1.94
CHRNA7-229ENST00000637552 DNM1LO00429 736 aa27.14■■□□□ 1.94
CHRNA7-229ENST00000637552 SEPT4O43236 478 aa27.14■■□□□ 1.94
CHRNA7-229ENST00000637552 TSPY3P0CV98 308 aa27.14■■□□□ 1.94
CHRNA7-229ENST00000637552 TSPY8P0CW00 308 aa27.14■■□□□ 1.94
CHRNA7-229ENST00000637552 REPS2Q8NFH8 660 aa27.14■■□□□ 1.94
CHRNA7-229ENST00000637552 CTDP1Q9Y5B0 961 aaPredicted RBP27.14■■□□□ 1.94
CHRNA7-229ENST00000637552 SALL3Q9BXA9 1300 aa27.14■■□□□ 1.93
CHRNA7-229ENST00000637552 TTLL1O95922 423 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 PGK2P07205 417 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 PPARAQ07869 468 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 ARRDC4Q8NCT1 418 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 TEX13BQ9BXU2 312 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 MTMR4Q9NYA4 1195 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 LAMA3Q16787 3333 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 PLXNA1Q9UIW2 1896 aa27.13■■□□□ 1.93
CHRNA7-229ENST00000637552 PLIN4Q96Q06 1357 aa27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 BMP8BP34820 402 aa27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 MAGEA10P43363 369 aaPredicted RBP27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 PRAMEF19Q5SWL8 479 aa27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 ANO1Q5XXA6 986 aa27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 SNRNP48Q6IEG0 339 aaKnown RBP27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 PRPF38AQ8NAV1 312 aaKnown RBP27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 YTHDC1Q96MU7 727 aaKnown RBP27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 SYNPO2Q9UMS6 1093 aa27.12■■□□□ 1.93
CHRNA7-229ENST00000637552 KBTBD13C9JR72 458 aa27.11■■□□□ 1.93
CHRNA7-229ENST00000637552 MYCNP04198 464 aaPredicted RBP27.11■■□□□ 1.93
CHRNA7-229ENST00000637552 HDAC1Q13547 482 aaPredicted RBP27.11■■□□□ 1.93
CHRNA7-229ENST00000637552 GJC2Q5T442 439 aaPredicted RBP27.11■■□□□ 1.93
CHRNA7-229ENST00000637552 LRRC47Q8N1G4 583 aaKnown RBP27.11■■□□□ 1.93
CHRNA7-229ENST00000637552 MKL1Q969V6 931 aa27.11■■□□□ 1.93
CHRNA7-229ENST00000637552 ZBED4O75132 1171 aa27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 ATN1P54259 1190 aaPredicted RBP27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 FAM47AQ5JRC9 791 aa27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 CCDC129Q6ZRS4 1044 aa27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 NEDD1Q8NHV4 660 aa27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 KIFC2Q96AC6 838 aa27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 EVI5LQ96CN4 794 aa27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 DIS3Q9Y2L1 958 aaKnown RBP27.1■■□□□ 1.93
CHRNA7-229ENST00000637552 TFAP4Q01664 338 aa27.09■■□□□ 1.93
CHRNA7-229ENST00000637552 GMCL1P1Q8NEA9 526 aa27.09■■□□□ 1.93
CHRNA7-229ENST00000637552 TINF2Q9BSI4 451 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms