RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 IGKV6D-41A0A0C4DH26 115 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 TSPY2A6NKD2 308 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 F5H6K3 240 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 HIP1O00291 1037 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 FOXP2O15409 715 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 HSPD1P10809 573 aaKnown RBP16.38■□□□□ 0.21
PNKP-228ENST00000637325 KLRC3Q07444 240 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 NCAPG2Q86XI2 1143 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 SHISA4Q96DD7 197 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 APBA2Q99767 749 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 MOV10L1Q9BXT6 1211 aaKnown RBP16.38■□□□□ 0.21
PNKP-228ENST00000637325 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.38■□□□□ 0.21
PNKP-228ENST00000637325 HMX1Q9NP08 348 aaPredicted RBP16.38■□□□□ 0.21
PNKP-228ENST00000637325 MTMR4Q9NYA4 1195 aa16.38■□□□□ 0.21
PNKP-228ENST00000637325 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
PNKP-228ENST00000637325 NDUFB10O96000 172 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 FGAP02671 866 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 ERCC3P19447 782 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 TRIM32Q13049 653 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
PNKP-228ENST00000637325 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
PNKP-228ENST00000637325 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
PNKP-228ENST00000637325 SHCBP1Q8NEM2 672 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 USP6NLQ92738 828 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 MKL1Q969V6 931 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
PNKP-228ENST00000637325 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 FBXO28Q9NVF7 368 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 PPP1R9AQ9ULJ8 1098 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 PLXNA1Q9UIW2 1896 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 PLIN4Q96Q06 1357 aa16.37■□□□□ 0.21
PNKP-228ENST00000637325 STRNO43815 780 aa16.36■□□□□ 0.21
PNKP-228ENST00000637325 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
PNKP-228ENST00000637325 CAPN2P17655 700 aa16.36■□□□□ 0.21
PNKP-228ENST00000637325 GRB14Q14449 540 aa16.36■□□□□ 0.21
PNKP-228ENST00000637325 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
PNKP-228ENST00000637325 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
PNKP-228ENST00000637325 SLF1Q9BQI6 1058 aa16.36■□□□□ 0.21
PNKP-228ENST00000637325 MROH8Q9H579 483 aa16.36■□□□□ 0.21
PNKP-228ENST00000637325 INCENPQ9NQS7 918 aa16.36■□□□□ 0.21
PNKP-228ENST00000637325 PAK6Q9NQU5 681 aaPredicted RBP16.36■□□□□ 0.21
PNKP-228ENST00000637325 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
PNKP-228ENST00000637325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
PNKP-228ENST00000637325 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
PNKP-228ENST00000637325 VWA5AO00534 786 aa16.35■□□□□ 0.21
PNKP-228ENST00000637325 SLC25A27O95847 323 aa16.35■□□□□ 0.21
PNKP-228ENST00000637325 TMEM132BQ14DG7 1078 aa16.35■□□□□ 0.21
PNKP-228ENST00000637325 CCL14Q16627 93 aa16.35■□□□□ 0.21
PNKP-228ENST00000637325 RRP12Q5JTH9 1297 aaKnown RBP16.35■□□□□ 0.21
PNKP-228ENST00000637325 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
PNKP-228ENST00000637325 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
PNKP-228ENST00000637325 SYNPO2Q9UMS6 1093 aa16.35■□□□□ 0.21
PNKP-228ENST00000637325 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
PNKP-228ENST00000637325 PDE4AP27815 886 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 STAT3P40763 770 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 HAND2P61296 217 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 GMCL1P1Q8NEA9 526 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 SLC5A4Q9NY91 659 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 STX8Q9UNK0 236 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 ZMYM6O95789 1325 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 SMCHD1A6NHR9 2005 aa16.34■□□□□ 0.21
PNKP-228ENST00000637325 LAMA4Q16363 1823 aa16.33■□□□□ 0.21
PNKP-228ENST00000637325 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.21
PNKP-228ENST00000637325 ORC4O43929 436 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 ZBED4O75132 1171 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 FCER1AP12319 257 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 BMP3P12645 472 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 ADORA2AP29274 412 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 COPB2P35606 906 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 CACNB2Q08289 660 aaPredicted RBP16.33■□□□□ 0.2
PNKP-228ENST00000637325 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 PRPF38AQ8NAV1 312 aaKnown RBP16.33■□□□□ 0.2
PNKP-228ENST00000637325 DPF3Q92784 378 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 KIFC2Q96AC6 838 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 CRISPLD2Q9H0B8 497 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 FEM1BQ9UK73 627 aa16.33■□□□□ 0.2
PNKP-228ENST00000637325 HOXC6P09630 235 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 IKQ13123 557 aaPredicted RBP16.32■□□□□ 0.2
PNKP-228ENST00000637325 FRMPD3Q5JV73 1810 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 MAP3K21Q5TCX8 1036 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 MFSD6Q6ZSS7 791 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 ABRAQ8N0Z2 381 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 NPLOC4Q8TAT6 608 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 MMP19Q99542 508 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 HTATIP2Q9BUP3 242 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 FLRT1Q9NZU1 646 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 TACC3Q9Y6A5 838 aa16.32■□□□□ 0.2
PNKP-228ENST00000637325 ZNF213O14771 459 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 NMT2O60551 498 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 FGRP09769 529 aa16.31■□□□□ 0.2
PNKP-228ENST00000637325 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
PNKP-228ENST00000637325 CCND3P30281 292 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms