RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ZNF219Q9P2Y4 722 aaPredicted RBP21.48■■□□□ 1.03
CLN5-216ENST00000636780 LEMD3Q9Y2U8 911 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 FRMPD2Q68DX3 1309 aaPredicted RBP21.48■■□□□ 1.03
CLN5-216ENST00000636780 NEMFO60524 1076 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 CDK8P49336 464 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 BLIDQ8IZY5 108 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 KCNQ5Q9NR82 932 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 GGA1Q9UJY5 639 aa21.48■■□□□ 1.03
CLN5-216ENST00000636780 ATP2C1P98194 919 aaPredicted RBP21.47■■□□□ 1.03
CLN5-216ENST00000636780 PCDHAC2Q9Y5I4 1007 aa21.47■■□□□ 1.03
CLN5-216ENST00000636780 CCT6AP40227 531 aaKnown RBP21.47■■□□□ 1.03
CLN5-216ENST00000636780 PPP2R5BQ15173 497 aa21.47■■□□□ 1.03
CLN5-216ENST00000636780 NT5DC1Q5TFE4 455 aa21.47■■□□□ 1.03
CLN5-216ENST00000636780 TBC1D16Q8TBP0 767 aa21.47■■□□□ 1.03
CLN5-216ENST00000636780 LRRC15Q8TF66 581 aa21.47■■□□□ 1.03
CLN5-216ENST00000636780 EYA3Q99504 573 aa21.47■■□□□ 1.03
CLN5-216ENST00000636780 GDAQ9Y2T3 454 aa21.47■■□□□ 1.03
CLN5-216ENST00000636780 CTIFO43310 598 aaKnown RBP21.46■■□□□ 1.03
CLN5-216ENST00000636780 BAG3O95817 575 aa21.46■■□□□ 1.03
CLN5-216ENST00000636780 ZNF18P17022 549 aa21.46■■□□□ 1.03
CLN5-216ENST00000636780 HOOK1Q9UJC3 728 aaKnown RBP21.46■■□□□ 1.03
CLN5-216ENST00000636780 CTNND2Q9UQB3 1225 aa21.46■■□□□ 1.03
CLN5-216ENST00000636780 KLRF2D3W0D1 207 aa21.46■■□□□ 1.03
CLN5-216ENST00000636780 DHX8Q14562 1220 aaKnown RBP21.46■■□□□ 1.03
CLN5-216ENST00000636780 PROM2Q8N271 834 aa21.46■■□□□ 1.03
CLN5-216ENST00000636780 RGS22Q8NE09 1264 aa21.46■■□□□ 1.03
CLN5-216ENST00000636780 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
CLN5-216ENST00000636780 TOGARAM2Q6ZUX3 1019 aa21.45■■□□□ 1.02
CLN5-216ENST00000636780 NOL10Q9BSC4 688 aaKnown RBP21.45■■□□□ 1.02
CLN5-216ENST00000636780 SHROOM1Q2M3G4 852 aaPredicted RBP21.45■■□□□ 1.02
CLN5-216ENST00000636780 MLKLQ8NB16 471 aa21.45■■□□□ 1.02
CLN5-216ENST00000636780 CCDC150Q8NCX0 1101 aa21.45■■□□□ 1.02
CLN5-216ENST00000636780 SPATA20Q8TB22 786 aa21.45■■□□□ 1.02
CLN5-216ENST00000636780 DNAI1Q9UI46 699 aa21.45■■□□□ 1.02
CLN5-216ENST00000636780 PCDHA6Q9UN73 950 aa21.45■■□□□ 1.02
CLN5-216ENST00000636780 PCDHA8Q9Y5H6 950 aa21.45■■□□□ 1.02
CLN5-216ENST00000636780 PPP1R3GB7ZBB8 358 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 KIF5BP33176 963 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 MSL1Q68DK7 614 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 LRRC47Q8N1G4 583 aaKnown RBP21.44■■□□□ 1.02
CLN5-216ENST00000636780 PDCL2Q8N4E4 241 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 C4orf32Q8N8J7 132 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 IRX2Q9BZI1 471 aaPredicted RBP21.44■■□□□ 1.02
CLN5-216ENST00000636780 FLT1P17948 1338 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 USP17L5A8MUK1 530 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 CACNB3P54284 484 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 RHBDL3P58872 404 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 SH3RF1Q7Z6J0 888 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 RASSF8Q8NHQ8 419 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 ENOX1Q8TC92 643 aaKnown RBP21.44■■□□□ 1.02
CLN5-216ENST00000636780 TMEM260Q9NX78 707 aa21.44■■□□□ 1.02
CLN5-216ENST00000636780 FAM196BA6NMK8 535 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 E2F4Q16254 413 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 RRAGBQ5VZM2 374 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 DGKHQ86XP1 1220 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 TMEM139Q8IV31 216 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 QTRT2Q9H974 415 aaKnown RBP21.43■■□□□ 1.02
CLN5-216ENST00000636780 TRIM49BA6NDI0 452 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 PCP11498 1178 aaKnown RBP21.43■■□□□ 1.02
CLN5-216ENST00000636780 TC2NQ8N9U0 490 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 GJA10Q969M2 543 aa21.43■■□□□ 1.02
CLN5-216ENST00000636780 CCDC194A0A1B0GVG4 234 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 RAD21O60216 631 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 ST5P78524 1137 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 GRM4Q14833 912 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 PIGSQ96S52 555 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 PCDHA4Q9UN74 947 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 PAXBP1Q9Y5B6 917 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 LETM2Q2VYF4 491 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 JAKMIP3Q5VZ66 844 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 PDXDC2PQ6P474 469 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 CERS5Q8N5B7 392 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 FERMT2Q96AC1 680 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 VPS16Q9H269 839 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 DDX4Q9NQI0 724 aaKnown RBP21.42■■□□□ 1.02
CLN5-216ENST00000636780 BIN2Q9UBW5 565 aaPredicted RBP21.42■■□□□ 1.02
CLN5-216ENST00000636780 STXBP3O00186 592 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 ELF2Q15723 593 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 APTXQ7Z2E3 356 aaKnown RBP21.42■■□□□ 1.02
CLN5-216ENST00000636780 ZBTB9Q96C00 473 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 EPC1Q9H2F5 836 aa21.42■■□□□ 1.02
CLN5-216ENST00000636780 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
CLN5-216ENST00000636780 RNF225M0QZC1 329 aaPredicted RBP21.41■■□□□ 1.02
CLN5-216ENST00000636780 CBFA2T2O43439 604 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 ATP2B2Q01814 1243 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 CRY2Q49AN0 593 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 KIF18AQ8NI77 898 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 HPS3Q969F9 1004 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 COA7Q96BR5 231 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 SYNRGQ9UMZ2 1314 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 SOWAHDA6NJG2 315 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 ANKRD7Q92527 254 aa21.41■■□□□ 1.02
CLN5-216ENST00000636780 NAPAP54920 295 aa21.4■■□□□ 1.02
CLN5-216ENST00000636780 PPP4CP60510 307 aa21.4■■□□□ 1.02
CLN5-216ENST00000636780 NR1I3Q14994 352 aa21.4■■□□□ 1.02
CLN5-216ENST00000636780 REXO1L1PQ8IX06 675 aa21.4■■□□□ 1.02
CLN5-216ENST00000636780 AMOTL1Q8IY63 956 aa21.4■■□□□ 1.02
CLN5-216ENST00000636780 RBM17Q96I25 401 aaKnown RBP21.4■■□□□ 1.02
CLN5-216ENST00000636780 GPCPD1Q9NPB8 672 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms