RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 COL6A1P12109 1028 aa21.91■■□□□ 1.1
CLN6-214ENST00000636314 EEF2P13639 858 aaKnown RBP21.91■■□□□ 1.1
CLN6-214ENST00000636314 RASA1P20936 1047 aa21.91■■□□□ 1.1
CLN6-214ENST00000636314 LRRC26Q2I0M4 334 aa21.91■■□□□ 1.1
CLN6-214ENST00000636314 LHX8Q68G74 356 aa21.91■■□□□ 1.1
CLN6-214ENST00000636314 LBX2Q6XYB7 198 aa21.91■■□□□ 1.1
CLN6-214ENST00000636314 CCDC129Q6ZRS4 1044 aa21.91■■□□□ 1.1
CLN6-214ENST00000636314 VCPKMTQ9H867 229 aa21.91■■□□□ 1.1
CLN6-214ENST00000636314 PARP14Q460N5 1801 aa21.9■■□□□ 1.1
CLN6-214ENST00000636314 TRIM6-TRIM34B2RNG4 842 aa21.9■■□□□ 1.1
CLN6-214ENST00000636314 CCNA1P78396 465 aa21.9■■□□□ 1.1
CLN6-214ENST00000636314 POTEEQ6S8J3 1075 aa21.9■■□□□ 1.1
CLN6-214ENST00000636314 SIAH1Q8IUQ4 282 aa21.9■■□□□ 1.1
CLN6-214ENST00000636314 SPICE1Q8N0Z3 855 aa21.9■■□□□ 1.1
CLN6-214ENST00000636314 RLFQ13129 1914 aa21.9■■□□□ 1.1
CLN6-214ENST00000636314 MYH4Q9Y623 1939 aa21.89■■□□□ 1.09
CLN6-214ENST00000636314 CNMDO75829 334 aa21.89■■□□□ 1.09
CLN6-214ENST00000636314 IRX6P78412 446 aaPredicted RBP21.89■■□□□ 1.09
CLN6-214ENST00000636314 MDM2Q00987 491 aaPredicted RBP21.89■■□□□ 1.09
CLN6-214ENST00000636314 MAP2K5Q13163 448 aa21.89■■□□□ 1.09
CLN6-214ENST00000636314 KIAA1755Q5JYT7 1200 aa21.89■■□□□ 1.09
CLN6-214ENST00000636314 GOPCQ9HD26 462 aa21.89■■□□□ 1.09
CLN6-214ENST00000636314 WDR46O15213 610 aaKnown RBP21.88■■□□□ 1.09
CLN6-214ENST00000636314 PRDM1O75626 825 aa21.88■■□□□ 1.09
CLN6-214ENST00000636314 SLC3A2P08195 630 aaKnown RBP21.88■■□□□ 1.09
CLN6-214ENST00000636314 COG2Q14746 738 aa21.88■■□□□ 1.09
CLN6-214ENST00000636314 MFSD14CQ5VZR4 134 aa21.88■■□□□ 1.09
CLN6-214ENST00000636314 PLEKHM2Q8IWE5 1019 aa21.88■■□□□ 1.09
CLN6-214ENST00000636314 RILPL2Q969X0 211 aa21.88■■□□□ 1.09
CLN6-214ENST00000636314 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLN6-214ENST00000636314 HELLSQ9NRZ9 838 aa21.88■■□□□ 1.09
CLN6-214ENST00000636314 STXBP5LQ9Y2K9 1186 aa21.88■■□□□ 1.09
CLN6-214ENST00000636314 RAD21O60216 631 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 FLOT1O75955 427 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 PDE4BQ07343 736 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 PPARAQ07869 468 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 TICAM2Q86XR7 235 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 ZNF444Q8N0Y2 327 aaPredicted RBP21.87■■□□□ 1.09
CLN6-214ENST00000636314 OSBPL3Q9H4L5 887 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 MTMR10Q9NXD2 777 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 HOXC10Q9NYD6 342 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 BTBD7Q9P203 1132 aa21.87■■□□□ 1.09
CLN6-214ENST00000636314 A0A0D9SFI3 127 aa21.86■■□□□ 1.09
CLN6-214ENST00000636314 CNGA1P29973 690 aa21.86■■□□□ 1.09
CLN6-214ENST00000636314 FAM227BQ96M60 508 aa21.86■■□□□ 1.09
CLN6-214ENST00000636314 SENP6Q9GZR1 1112 aaPredicted RBP21.86■■□□□ 1.09
CLN6-214ENST00000636314 FLRT1Q9NZU1 646 aa21.86■■□□□ 1.09
CLN6-214ENST00000636314 IVNS1ABPQ9Y6Y0 642 aa21.86■■□□□ 1.09
CLN6-214ENST00000636314 SLC15A5A6NIM6 579 aa21.85■■□□□ 1.09
CLN6-214ENST00000636314 FOXP2O15409 715 aa21.85■■□□□ 1.09
CLN6-214ENST00000636314 PTPREP23469 700 aa21.85■■□□□ 1.09
CLN6-214ENST00000636314 MCMDC2Q4G0Z9 681 aa21.85■■□□□ 1.09
CLN6-214ENST00000636314 SAMD1Q6SPF0 538 aaPredicted RBP21.85■■□□□ 1.09
CLN6-214ENST00000636314 PLIN4Q96Q06 1357 aa21.85■■□□□ 1.09
CLN6-214ENST00000636314 DSG3P32926 999 aa21.84■■□□□ 1.09
CLN6-214ENST00000636314 NMIQ13287 307 aaPredicted RBP21.84■■□□□ 1.09
CLN6-214ENST00000636314 VPS53Q5VIR6 699 aa21.84■■□□□ 1.09
CLN6-214ENST00000636314 MB21D1Q8N884 522 aa21.84■■□□□ 1.09
CLN6-214ENST00000636314 NYAP2Q9P242 653 aa21.84■■□□□ 1.09
CLN6-214ENST00000636314 DDX20Q9UHI6 824 aaKnown RBP21.84■■□□□ 1.09
CLN6-214ENST00000636314 COL11A1P12107 1806 aaPredicted RBP21.84■■□□□ 1.09
CLN6-214ENST00000636314 LAMA2P24043 3122 aaKnown RBP21.83■■□□□ 1.09
CLN6-214ENST00000636314 IGKV6D-41A0A0C4DH26 115 aa21.83■■□□□ 1.09
CLN6-214ENST00000636314 TSPY3P0CV98 308 aa21.83■■□□□ 1.09
CLN6-214ENST00000636314 TSPY8P0CW00 308 aa21.83■■□□□ 1.09
CLN6-214ENST00000636314 ATG4CQ96DT6 458 aa21.83■■□□□ 1.09
CLN6-214ENST00000636314 LBHD1Q9BQE6 289 aaPredicted RBP21.83■■□□□ 1.09
CLN6-214ENST00000636314 LTBP2Q14767 1821 aa21.83■■□□□ 1.08
CLN6-214ENST00000636314 ATN1P54259 1190 aaPredicted RBP21.82■■□□□ 1.08
CLN6-214ENST00000636314 FAM83BQ5T0W9 1011 aa21.82■■□□□ 1.08
CLN6-214ENST00000636314 NPLOC4Q8TAT6 608 aa21.82■■□□□ 1.08
CLN6-214ENST00000636314 CEP95Q96GE4 821 aa21.82■■□□□ 1.08
CLN6-214ENST00000636314 SPATC1LQ9H0A9 340 aa21.82■■□□□ 1.08
CLN6-214ENST00000636314 ZNF236Q9UL36 1845 aa21.82■■□□□ 1.08
CLN6-214ENST00000636314 CCDC171Q6TFL3 1326 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 MSCO60682 206 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 CYP2C19P33261 490 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 CTDSPL2Q05D32 466 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 GRB14Q14449 540 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 PLS1Q14651 629 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 ZNF589Q86UQ0 364 aaPredicted RBP21.81■■□□□ 1.08
CLN6-214ENST00000636314 NEDD1Q8NHV4 660 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 MOV10L1Q9BXT6 1211 aaKnown RBP21.81■■□□□ 1.08
CLN6-214ENST00000636314 CLIP2Q9UDT6 1046 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 UNC80Q8N2C7 3258 aa21.81■■□□□ 1.08
CLN6-214ENST00000636314 TTLL1O95922 423 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 NDUFB10O96000 172 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 SDSP20132 328 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 TFAP4Q01664 338 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 ALX1Q15699 326 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 FAM47AQ5JRC9 791 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 DIAPH3Q9NSV4 1193 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 FBXO28Q9NVF7 368 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 MTMR4Q9NYA4 1195 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 PRKAG2Q9UGJ0 569 aa21.8■■□□□ 1.08
CLN6-214ENST00000636314 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.8■■□□□ 1.087e-6■■■■■ 33.6
CLN6-214ENST00000636314 CUL9Q8IWT3 2517 aa21.79■■□□□ 1.08
CLN6-214ENST00000636314 ZNFX1Q9P2E3 1918 aaKnown RBP21.79■■□□□ 1.08
CLN6-214ENST00000636314 F5H6K3 240 aa21.79■■□□□ 1.08
CLN6-214ENST00000636314 HOXC6P09630 235 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms