RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 NYAP2Q9P242 653 aa21.36■■□□□ 1.01
PNKP-225ENST00000636214 CTDP1Q9Y5B0 961 aaPredicted RBP21.36■■□□□ 1.01
PNKP-225ENST00000636214 COPB2P35606 906 aa21.35■■□□□ 1.01
PNKP-225ENST00000636214 ZMYM1Q5SVZ6 1142 aa21.35■■□□□ 1.01
PNKP-225ENST00000636214 ZNF236Q9UL36 1845 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 MYH4Q9Y623 1939 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 PRDM1O75626 825 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 TSPY3P0CV98 308 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 TSPY8P0CW00 308 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 FCER1AP12319 257 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 ABRAQ8N0Z2 381 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 NPLOC4Q8TAT6 608 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 EVI5LQ96CN4 794 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 SEC62Q99442 399 aaKnown RBP21.34■■□□□ 1.01
PNKP-225ENST00000636214 FLRT1Q9NZU1 646 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 PPP1R9AQ9ULJ8 1098 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 PARP14Q460N5 1801 aa21.34■■□□□ 1.01
PNKP-225ENST00000636214 GREB1LQ9C091 1923 aaPredicted RBP21.33■■□□□ 1.01
PNKP-225ENST00000636214 CYP2C19P33261 490 aa21.33■■□□□ 1.01
PNKP-225ENST00000636214 OLFML2BQ68BL8 750 aa21.33■■□□□ 1.01
PNKP-225ENST00000636214 C7orf61Q8IZ16 206 aa21.33■■□□□ 1.01
PNKP-225ENST00000636214 SLF1Q9BQI6 1058 aa21.33■■□□□ 1.01
PNKP-225ENST00000636214 RWDD1Q9H446 243 aaPredicted RBP21.33■■□□□ 1.01
PNKP-225ENST00000636214 CLIP2Q9UDT6 1046 aa21.33■■□□□ 1.01
PNKP-225ENST00000636214 ISY1Q9ULR0 285 aaKnown RBP21.33■■□□□ 1.01
PNKP-225ENST00000636214 COL11A1P12107 1806 aaPredicted RBP21.32■■□□□ 1
PNKP-225ENST00000636214 STAT3P40763 770 aa21.32■■□□□ 1
PNKP-225ENST00000636214 PPARAQ07869 468 aa21.32■■□□□ 1
PNKP-225ENST00000636214 TMEM132BQ14DG7 1078 aa21.32■■□□□ 1
PNKP-225ENST00000636214 PPP4R3BQ5MIZ7 849 aa21.32■■□□□ 1
PNKP-225ENST00000636214 MMP19Q99542 508 aa21.32■■□□□ 1
PNKP-225ENST00000636214 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.32■■□□□ 1
PNKP-225ENST00000636214 FBXO28Q9NVF7 368 aa21.32■■□□□ 1
PNKP-225ENST00000636214 DDX20Q9UHI6 824 aaKnown RBP21.32■■□□□ 1
PNKP-225ENST00000636214 F5H6K3 240 aa21.31■■□□□ 1
PNKP-225ENST00000636214 VWA5AO00534 786 aa21.31■■□□□ 1
PNKP-225ENST00000636214 TTLL1O95922 423 aa21.31■■□□□ 1
PNKP-225ENST00000636214 KLRC3Q07444 240 aa21.31■■□□□ 1
PNKP-225ENST00000636214 KCTD2Q14681 263 aa21.31■■□□□ 1
PNKP-225ENST00000636214 RIOX2Q8IUF8 465 aa21.31■■□□□ 1
PNKP-225ENST00000636214 PCDH10Q9P2E7 1040 aa21.31■■□□□ 1
PNKP-225ENST00000636214 ALPK3Q96L96 1907 aa21.31■■□□□ 1
PNKP-225ENST00000636214 NDUFB10O96000 172 aa21.3■■□□□ 1
PNKP-225ENST00000636214 FXR1P51114 621 aaKnown RBP eCLIP21.3■■□□□ 1
PNKP-225ENST00000636214 PDE1AP54750 535 aa21.3■■□□□ 1
PNKP-225ENST00000636214 LHX8Q68G74 356 aa21.3■■□□□ 1
PNKP-225ENST00000636214 CEP95Q96GE4 821 aa21.3■■□□□ 1
PNKP-225ENST00000636214 NUP88Q99567 741 aaPredicted RBP21.3■■□□□ 1
PNKP-225ENST00000636214 RBM27Q9P2N5 1060 aaKnown RBP21.3■■□□□ 1
PNKP-225ENST00000636214 STAP2Q9UGK3 403 aa21.3■■□□□ 1
PNKP-225ENST00000636214 SYNPO2Q9UMS6 1093 aa21.3■■□□□ 1
PNKP-225ENST00000636214 ADAMTS5Q9UNA0 930 aa21.3■■□□□ 1
PNKP-225ENST00000636214 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
PNKP-225ENST00000636214 ZNFX1Q9P2E3 1918 aaKnown RBP21.29■■□□□ 1
PNKP-225ENST00000636214 COBLO75128 1261 aa21.29■■□□□ 1
PNKP-225ENST00000636214 ZBED4O75132 1171 aa21.29■■□□□ 1
PNKP-225ENST00000636214 CCDC129Q6ZRS4 1044 aa21.29■■□□□ 1
PNKP-225ENST00000636214 PRPF38AQ8NAV1 312 aaKnown RBP21.29■■□□□ 1
PNKP-225ENST00000636214 MTMR4Q9NYA4 1195 aa21.29■■□□□ 1
PNKP-225ENST00000636214 FRMPD3Q5JV73 1810 aa21.29■■□□□ 1
PNKP-225ENST00000636214 PLIN4Q96Q06 1357 aa21.28■■□□□ 1
PNKP-225ENST00000636214 IGKV6D-41A0A0C4DH26 115 aa21.28■■□□□ 1
PNKP-225ENST00000636214 TRIM6-TRIM34B2RNG4 842 aa21.28■■□□□ 1
PNKP-225ENST00000636214 CYBAP13498 195 aa21.28■■□□□ 1
PNKP-225ENST00000636214 MNX1P50219 401 aaPredicted RBP21.28■■□□□ 1
PNKP-225ENST00000636214 TFAP4Q01664 338 aa21.28■■□□□ 1
PNKP-225ENST00000636214 LRRC47Q8N1G4 583 aaKnown RBP21.28■■□□□ 1
PNKP-225ENST00000636214 NEDD1Q8NHV4 660 aa21.28■■□□□ 1
PNKP-225ENST00000636214 TEX13BQ9BXU2 312 aa21.28■■□□□ 1
PNKP-225ENST00000636214 LNPKQ9C0E8 428 aa21.28■■□□□ 1
PNKP-225ENST00000636214 HELLSQ9NRZ9 838 aa21.28■■□□□ 1
PNKP-225ENST00000636214 ZMYND8Q9ULU4 1186 aaPredicted RBP21.28■■□□□ 1
PNKP-225ENST00000636214 TSPY2A6NKD2 308 aa21.27■■□□□ 1
PNKP-225ENST00000636214 SLC4A3P48751 1232 aa21.27■■□□□ 1
PNKP-225ENST00000636214 FAM47AQ5JRC9 791 aa21.27■■□□□ 1
PNKP-225ENST00000636214 SNRNP48Q6IEG0 339 aaKnown RBP21.27■■□□□ 1
PNKP-225ENST00000636214 MKL1Q969V6 931 aa21.27■■□□□ 1
PNKP-225ENST00000636214 KIFC2Q96AC6 838 aa21.27■■□□□ 1
PNKP-225ENST00000636214 MAML3Q96JK9 1138 aa21.27■■□□□ 1
PNKP-225ENST00000636214 FEM1BQ9UK73 627 aa21.27■■□□□ 1
PNKP-225ENST00000636214 PFASO15067 1338 aa21.27■□□□□ 0.99
PNKP-225ENST00000636214 KBTBD13C9JR72 458 aa21.26■□□□□ 0.99
PNKP-225ENST00000636214 SEPT4O43236 478 aa21.26■□□□□ 0.99
PNKP-225ENST00000636214 IKQ13123 557 aaPredicted RBP21.26■□□□□ 0.99
PNKP-225ENST00000636214 SLFN13Q68D06 897 aa21.26■□□□□ 0.99
PNKP-225ENST00000636214 ARRDC4Q8NCT1 418 aa21.26■□□□□ 0.99
PNKP-225ENST00000636214 GMCL1P1Q8NEA9 526 aa21.26■□□□□ 0.99
PNKP-225ENST00000636214 TOMM22Q9NS69 142 aa21.26■□□□□ 0.99
PNKP-225ENST00000636214 ZNF214Q9UL59 606 aaPredicted RBP21.26■□□□□ 0.99
PNKP-225ENST00000636214 A0A1W2PPC1 479 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 MYCNP04198 464 aaPredicted RBP21.25■□□□□ 0.99
PNKP-225ENST00000636214 RANBP2P49792 3224 aaKnown RBP21.25■□□□□ 0.99
PNKP-225ENST00000636214 MCMDC2Q4G0Z9 681 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 TICAM2Q86XR7 235 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 CPXCR1Q8N123 301 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 TRPV1Q8NER1 839 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 DDX11Q96FC9 970 aa21.25■□□□□ 0.99
PNKP-225ENST00000636214 SENP6Q9GZR1 1112 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms