RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 MCM7P33993 719 aa26■■□□□ 1.75
NKX2-3-202ENST00000622383 HSP90AA2PQ14568 343 aaPredicted RBP26■■□□□ 1.75
NKX2-3-202ENST00000622383 LTBP1Q14766 1721 aa25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 DDX60LQ5H9U9 1706 aaKnown RBP25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 SFPQP23246 707 aaKnown RBP eCLIP25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 AFMP43652 599 aa25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 CFAP100Q494V2 611 aa25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 NYAP1Q6ZVC0 841 aa25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 CCAR2Q8N163 923 aaKnown RBP25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 C4orf32Q8N8J7 132 aa25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 EYA3Q99504 573 aa25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 INTS13Q9NVM9 706 aa25.99■■□□□ 1.75
NKX2-3-202ENST00000622383 TXNRD1Q16881 649 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 WWC2Q6AWC2 1192 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 SP8Q8IXZ3 490 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 NFE2L3Q9Y4A8 694 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 PPEF1O14829 653 aaPredicted RBP25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 DPYDQ12882 1025 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 DHX8Q14562 1220 aaKnown RBP25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 VSTM4Q8IW00 320 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 SLF2Q8IX21 1173 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 NEDD1Q8NHV4 660 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 CCDC34Q96HJ3 373 aa25.98■■□□□ 1.75
NKX2-3-202ENST00000622383 TMEM232C9JQI7 657 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 CASP1P29466 404 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 E2F4Q16254 413 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 TMC4Q7Z404 712 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 TRMT44Q8IYL2 757 aaKnown RBP25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 RASGRP4Q8TDF6 673 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 MTMR7Q9Y216 660 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 CDK5RAP2Q96SN8 1893 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 LRRC37AA6NMS7 1700 aa25.97■■□□□ 1.75
NKX2-3-202ENST00000622383 ERCC5P28715 1186 aaPredicted RBP25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 RASGRP2Q7LDG7 609 aa25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 STXBP3O00186 592 aa25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 GOLGA8HP0CJ92 632 aa25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 GTF2IP78347 998 aa25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 DAGLBQ8NCG7 672 aa25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 TRMT1Q9NXH9 659 aaKnown RBP25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 BARHL2Q9NY43 387 aa25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 DAGLAQ9Y4D2 1042 aa25.96■■□□□ 1.75
NKX2-3-202ENST00000622383 HSP90AA4PQ58FG1 418 aa25.95■■□□□ 1.75
NKX2-3-202ENST00000622383 E4F1Q66K89 784 aaPredicted RBP25.95■■□□□ 1.75
NKX2-3-202ENST00000622383 ARL6IP4Q66PJ3 421 aaKnown RBP25.95■■□□□ 1.75
NKX2-3-202ENST00000622383 LZTS2Q9BRK4 669 aa25.95■■□□□ 1.75
NKX2-3-202ENST00000622383 PCDHA6Q9UN73 950 aa25.95■■□□□ 1.75
NKX2-3-202ENST00000622383 ATP6V0A2Q9Y487 856 aa25.95■■□□□ 1.75
NKX2-3-202ENST00000622383 PCDHA8Q9Y5H6 950 aa25.95■■□□□ 1.75
NKX2-3-202ENST00000622383 CEP135Q66GS9 1140 aa25.95■■□□□ 1.74
NKX2-3-202ENST00000622383 HEATR3Q7Z4Q2 680 aa25.95■■□□□ 1.74
NKX2-3-202ENST00000622383 GSDMAQ96QA5 445 aa25.95■■□□□ 1.74
NKX2-3-202ENST00000622383 KLRF2D3W0D1 207 aa25.94■■□□□ 1.74
NKX2-3-202ENST00000622383 KCNJ6P48051 423 aa25.94■■□□□ 1.74
NKX2-3-202ENST00000622383 NOVP48745 357 aa25.94■■□□□ 1.74
NKX2-3-202ENST00000622383 PAXBP1Q9Y5B6 917 aa25.94■■□□□ 1.74
NKX2-3-202ENST00000622383 RIMBP2O15034 1052 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 CD44P16070 742 aaKnown RBP25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 PTPN14Q15678 1187 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 PTPN21Q16825 1174 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 CT47A1Q5JQC4 288 aaPredicted RBP25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 GALNT17Q6IS24 598 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 PDXDC2PQ6P474 469 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 IQUBQ8NA54 791 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 CCDC148Q8NFR7 591 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 SPZ1Q9BXG8 430 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 COA1Q9GZY4 146 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 CPVLQ9H3G5 476 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 SAMSN1Q9NSI8 373 aaKnown RBP25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 CUL4BQ13620 913 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 CEP95Q96GE4 821 aa25.93■■□□□ 1.74
NKX2-3-202ENST00000622383 CTIFO43310 598 aaKnown RBP25.92■■□□□ 1.74
NKX2-3-202ENST00000622383 ZNF710Q8N1W2 664 aa25.92■■□□□ 1.74
NKX2-3-202ENST00000622383 MTRQ99707 1265 aa25.92■■□□□ 1.74
NKX2-3-202ENST00000622383 PDCL3Q9H2J4 239 aa25.92■■□□□ 1.74
NKX2-3-202ENST00000622383 TMX1Q9H3N1 280 aa25.92■■□□□ 1.74
NKX2-3-202ENST00000622383 BRWD3Q6RI45 1802 aa25.92■■□□□ 1.74
NKX2-3-202ENST00000622383 CCDC194A0A1B0GVG4 234 aa25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 SRGNP10124 158 aa25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 TOP1P11387 765 aaKnown RBP25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 LONP1P36776 959 aaKnown RBP25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 FAM177A1Q8N128 213 aaPredicted RBP25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 CERS5Q8N5B7 392 aa25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 STAMQ92783 540 aa25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 CDK11BP21127 795 aaKnown RBP25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 USP17L2Q6R6M4 530 aa25.91■■□□□ 1.74
NKX2-3-202ENST00000622383 PARP1P09874 1014 aaKnown RBP25.9■■□□□ 1.74
NKX2-3-202ENST00000622383 TBX2Q13207 712 aaPredicted RBP25.9■■□□□ 1.74
NKX2-3-202ENST00000622383 PYM1Q9BRP8 204 aaKnown RBP25.9■■□□□ 1.74
NKX2-3-202ENST00000622383 PSDA5PKW4 1024 aaPredicted RBP25.89■■□□□ 1.74
NKX2-3-202ENST00000622383 PPP1R3GB7ZBB8 358 aa25.89■■□□□ 1.74
NKX2-3-202ENST00000622383 ZMYND12Q9H0C1 365 aa25.89■■□□□ 1.74
NKX2-3-202ENST00000622383 SUGT1Q9Y2Z0 365 aa25.89■■□□□ 1.74
NKX2-3-202ENST00000622383 ANKRD31Q8N7Z5 1873 aa25.89■■□□□ 1.74
NKX2-3-202ENST00000622383 GABPAQ06546 454 aa25.89■■□□□ 1.73
NKX2-3-202ENST00000622383 INF2Q27J81 1249 aa25.89■■□□□ 1.73
NKX2-3-202ENST00000622383 SPATA1Q5VX52 437 aa25.89■■□□□ 1.73
NKX2-3-202ENST00000622383 COL23A1Q86Y22 540 aaPredicted RBP25.89■■□□□ 1.73
NKX2-3-202ENST00000622383 SMYD4Q8IYR2 804 aaPredicted RBP25.89■■□□□ 1.73
NKX2-3-202ENST00000622383 PPP1R13BQ96KQ4 1090 aa25.89■■□□□ 1.73
NKX2-3-202ENST00000622383 TMEM60Q9H2L4 133 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms