RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 MAP3K15Q6ZN16 1313 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 CPDO75976 1380 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 PRKAB2O43741 272 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 DCAF17Q5H9S7 520 aaPredicted RBP9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 GRAMD1CQ8IYS0 662 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 IFNL3Q8IZI9 196 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 RDH13Q8NBN7 331 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 CCDC148Q8NFR7 591 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 LPIN2Q92539 896 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 FERMT2Q96AC1 680 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 CCP110O43303 1012 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 CSF1RP07333 972 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 CETN2P41208 172 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 CACNB3P54284 484 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 UBE3CQ15386 1083 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 KRBA2Q6ZNG9 492 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 LRRN4CLQ8ND94 238 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 UBN2Q6ZU65 1347 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 IKBKBO14920 756 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 CUTAO60888 179 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 PPP6R2O75170 966 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 GUCY1A2P33402 732 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 KRT27Q7Z3Y8 459 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 METTL16Q86W50 562 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 STRBPQ96SI9 672 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 LY9Q9HBG7 655 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 ERICH4A6NGS2 130 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 KCNQ2O43526 872 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 ETF1P62495 437 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 NR5A1Q13285 461 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 NOSTRINQ8IVI9 506 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 VPS54Q9P1Q0 977 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 NFE2L3Q9Y4A8 694 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 FRMPD2Q68DX3 1309 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 KIF5CO60282 957 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 FAM13AO94988 1023 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 ADKP55263 362 aaKnown RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 GNG11P61952 73 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 IRX3P78415 501 aaPredicted RBP9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 PLCB3Q01970 1234 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 GRIN1Q05586 938 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 UBE4AQ14139 1066 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 DTHD1Q6ZMT9 781 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 TIGD1Q96MW7 591 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 TMOD4Q9NZQ9 345 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
PTPDC1-204ENST00000620992 NOP56O00567 594 aaKnown RBP9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 MMP10P09238 476 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 UBXN2AP68543 259 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 TRIM28Q13263 835 aaKnown RBP9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 BIRC3Q13489 604 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 PTPAQ15257 358 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 Q3C1V9 767 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 RESP18Q5W5W9 173 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 DPY19L2Q6NUT2 758 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 MIGA2Q7L4E1 593 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 IGDCC4Q8TDY8 1250 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 ALAS1P13196 640 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 CCT6AP40227 531 aaKnown RBP9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 WDR66Q8TBY9 1149 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 ZFP91Q96JP5 570 aaPredicted RBP9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 CARD6Q9BX69 1037 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 FAM107BQ9H098 131 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 MYO9BQ13459 2157 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 CAMTA1Q9Y6Y1 1673 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 ZSCAN12O43309 604 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 RAPGEF1Q13905 1077 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 POSTNQ15063 836 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 FOXP4Q8IVH2 680 aaPredicted RBP9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 ST7Q9NRC1 585 aa9.27□□□□□ -0.93
PTPDC1-204ENST00000620992 POLR3GO15318 223 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 SERPINB2P05120 415 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 CALML3P27482 149 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 SETQ01105 290 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 RASGRF1Q13972 1273 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 DIXDC1Q155Q3 683 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 TAF12Q16514 161 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 TUBE1Q9UJT0 475 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 EEF2P13639 858 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 ARL1P40616 181 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 KARSQ15046 597 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 EEPD1Q7L9B9 569 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 VSTM4Q8IW00 320 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 TRERF1Q96PN7 1200 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 BAG1Q99933 345 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 PCDHB6Q9Y5E3 794 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 WDR19Q8NEZ3 1342 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 KIF1AQ12756 1690 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 ATRXP46100 2492 aa9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 CCNT1O60563 726 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 FGFR1OPO95684 399 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-204ENST00000620992 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms