RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-224ENST00000619186 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
TP53-224ENST00000619186 GPKOWQ92917 476 aaPredicted RBP eCLIP12.38□□□□□ -0.43
TP53-224ENST00000619186 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 ZSCAN20P17040 1043 aaPredicted RBP12.37□□□□□ -0.43
TP53-224ENST00000619186 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
TP53-224ENST00000619186 ERCC6LQ2NKX8 1250 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 CCDC93Q567U6 631 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 FBXO38Q6PIJ6 1188 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 POTEAQ6S8J7 498 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 SH3RF1Q7Z6J0 888 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 DNAI1Q9UI46 699 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 XDHP47989 1333 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 USP17L3A6NCW0 530 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 USP17L4A6NCW7 530 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 SERPINB2P05120 415 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
TP53-224ENST00000619186 USP17L1Q7RTZ2 530 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 ELOA2Q8IYF1 753 aaPredicted RBP12.37□□□□□ -0.43
TP53-224ENST00000619186 ENOX1Q8TC92 643 aaKnown RBP12.37□□□□□ -0.43
TP53-224ENST00000619186 DESI2Q9BSY9 194 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 CPVLQ9H3G5 476 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 L2HGDHQ9H9P8 463 aa12.37□□□□□ -0.43
TP53-224ENST00000619186 MCM7P33993 719 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 CUL4BQ13620 913 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 SYCP1Q15431 976 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 TTC38Q5R3I4 469 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 COL23A1Q86Y22 540 aaPredicted RBP12.36□□□□□ -0.43
TP53-224ENST00000619186 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 MLKLQ8NB16 471 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
TP53-224ENST00000619186 LAMB1P07942 1786 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 NR1I3Q14994 352 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 HOMER1Q86YM7 354 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 SH3RF3Q8TEJ3 882 aaPredicted RBP12.36□□□□□ -0.43
TP53-224ENST00000619186 WDR24Q96S15 920 aa12.36□□□□□ -0.43
TP53-224ENST00000619186 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
TP53-224ENST00000619186 TSPY2A6NKD2 308 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 CBFA2T2O43439 604 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 ORC4O43929 436 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 DDAH1O94760 285 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 SLU7O95391 586 aaKnown RBP12.35□□□□□ -0.43
TP53-224ENST00000619186 SCG2P13521 617 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 RXRBP28702 533 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 PLCD1P51178 756 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 ETF1P62495 437 aaKnown RBP12.35□□□□□ -0.43
TP53-224ENST00000619186 ATP2C1P98194 919 aaPredicted RBP12.35□□□□□ -0.43
TP53-224ENST00000619186 E2F4Q16254 413 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 FAM43BQ6ZT52 329 aaPredicted RBP12.35□□□□□ -0.43
TP53-224ENST00000619186 EPC1Q9H2F5 836 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 RBM28Q9NW13 759 aaKnown RBP12.35□□□□□ -0.43
TP53-224ENST00000619186 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 CEP131Q9UPN4 1083 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 PP2D1A8MPX8 630 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 CYTH3O43739 400 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 KCNJ6P48051 423 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 NLRP5P59047 1200 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 TFAP4Q01664 338 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 CTCFLQ8NI51 663 aaPredicted RBP12.35□□□□□ -0.43
TP53-224ENST00000619186 LRRC15Q8TF66 581 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 CRNKL1Q9BZJ0 848 aaKnown RBP12.35□□□□□ -0.43
TP53-224ENST00000619186 PPP2R2CQ9Y2T4 447 aa12.35□□□□□ -0.43
TP53-224ENST00000619186 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
TP53-224ENST00000619186 XBP1P17861 261 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
TP53-224ENST00000619186 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 SPECC1LQ69YQ0 1117 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 BAG1Q99933 345 aaPredicted RBP12.34□□□□□ -0.43
TP53-224ENST00000619186 MAPK8IP1Q9UQF2 711 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 A0A1B0GTH6 734 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 GOLGA8HP0CJ92 632 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 PDXDC2PQ6P474 469 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 DZIP1Q86YF9 867 aaKnown RBP12.34□□□□□ -0.43
TP53-224ENST00000619186 C4orf32Q8N8J7 132 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 CPLX3Q8WVH0 158 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 MRPL44Q9H9J2 332 aaKnown RBP12.34□□□□□ -0.43
TP53-224ENST00000619186 HOOK1Q9UJC3 728 aaKnown RBP12.34□□□□□ -0.43
TP53-224ENST00000619186 PRDM4Q9UKN5 801 aa12.34□□□□□ -0.43
TP53-224ENST00000619186 RNF225M0QZC1 329 aaPredicted RBP12.33□□□□□ -0.44
TP53-224ENST00000619186 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 TRIML1Q8N9V2 468 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 ANKIB1Q9P2G1 1089 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 SAP30BPQ9UHR5 308 aaKnown RBP12.33□□□□□ -0.44
TP53-224ENST00000619186 DDX41Q9UJV9 622 aaKnown RBP12.33□□□□□ -0.44
TP53-224ENST00000619186 CTNND2Q9UQB3 1225 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.445e-7■■□□□ 14.2
TP53-224ENST00000619186 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
TP53-224ENST00000619186 SYNRGQ9UMZ2 1314 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms