RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 PLIN4Q96Q06 1357 aa17.36■□□□□ 0.37
CBX5-206ENST00000618078 A0A087X0B3 334 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 STXBP3O00186 592 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
CBX5-206ENST00000618078 PRR29P0C7W0 189 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 SHMT1P34896 483 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 NOVP48745 357 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 TCP10Q12799 353 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 HOMER1Q86YM7 354 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 ZNF579Q8NAF0 562 aaKnown RBP17.35■□□□□ 0.37
CBX5-206ENST00000618078 KCNF1Q9H3M0 494 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 MTMR4Q9NYA4 1195 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 C21orf2O43822 256 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 PTGDRQ13258 359 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 ZDHHC15Q96MV8 337 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 PCDHA4Q9UN74 947 aa17.35■□□□□ 0.37
CBX5-206ENST00000618078 FRMPD2Q68DX3 1309 aaPredicted RBP17.35■□□□□ 0.37
CBX5-206ENST00000618078 ZNF500O60304 480 aaPredicted RBP17.34■□□□□ 0.37
CBX5-206ENST00000618078 RBM5P52756 815 aaKnown RBP eCLIP17.34■□□□□ 0.37
CBX5-206ENST00000618078 UBA5Q9GZZ9 404 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 VAT1LQ9HCJ6 419 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 PCDHA5Q9Y5H7 936 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 IGKV6D-41A0A0C4DH26 115 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 MCM7P33993 719 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 MDM2Q00987 491 aaPredicted RBP17.34■□□□□ 0.37
CBX5-206ENST00000618078 SHROOM1Q2M3G4 852 aaPredicted RBP17.34■□□□□ 0.37
CBX5-206ENST00000618078 DNAJC18Q9H819 358 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 YDJCA8MPS7 323 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 M0R2N6 131 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 CALML3P27482 149 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 C17orf53Q8N3J3 647 aaPredicted RBP17.34■□□□□ 0.37
CBX5-206ENST00000618078 SPZ1Q9BXG8 430 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 NAT10Q9H0A0 1025 aaKnown RBP17.34■□□□□ 0.37
CBX5-206ENST00000618078 SH3GLB2Q9NR46 395 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 BARHL2Q9NY43 387 aa17.34■□□□□ 0.37
CBX5-206ENST00000618078 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 ACTN4O43707 911 aaKnown RBP17.33■□□□□ 0.36
CBX5-206ENST00000618078 PDHBP11177 359 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 PTGS1P23219 599 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 ATP2C1P98194 919 aaPredicted RBP17.33■□□□□ 0.36
CBX5-206ENST00000618078 KIAA2012Q0VF49 1180 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 SYMPKQ92797 1274 aaKnown RBP17.33■□□□□ 0.36
CBX5-206ENST00000618078 MYH4Q9Y623 1939 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 SARM1Q6SZW1 724 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 DRC7Q8IY82 874 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 PIGSQ96S52 555 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 PCDHA6Q9UN73 950 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 PCDHA8Q9Y5H6 950 aa17.33■□□□□ 0.36
CBX5-206ENST00000618078 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
CBX5-206ENST00000618078 DDTLA6NHG4 134 aaPredicted RBP17.32■□□□□ 0.36
CBX5-206ENST00000618078 BMP6P22004 513 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 IL17AQ16552 155 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 DHX58Q96C10 678 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 LZTS2Q9BRK4 669 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 MORC2Q9Y6X9 1032 aaPredicted RBP17.32■□□□□ 0.36
CBX5-206ENST00000618078 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 NCAPHQ15003 741 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 POSTNQ15063 836 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
CBX5-206ENST00000618078 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
CBX5-206ENST00000618078 HLA-DOAP06340 250 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 CCDC186Q7Z3E2 898 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 BPIFA3Q9BQP9 254 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 SWAP70Q9UH65 585 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 BMP15O95972 392 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 NAPAP54920 295 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 CCDC148Q8NFR7 591 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 FERMT2Q96AC1 680 aa17.31■□□□□ 0.36
CBX5-206ENST00000618078 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
CBX5-206ENST00000618078 ATP2B2Q01814 1243 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 INF2Q27J81 1249 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 GPCPD1Q9NPB8 672 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 MAN1B1Q9UKM7 699 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 PYCARDQ9ULZ3 195 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 CASP1P29466 404 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 DAGLBQ8NCG7 672 aa17.3■□□□□ 0.36
CBX5-206ENST00000618078 RRP36Q96EU6 259 aaKnown RBP17.3■□□□□ 0.36
CBX5-206ENST00000618078 TTLL1O95922 423 aa17.29■□□□□ 0.36
CBX5-206ENST00000618078 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.29■□□□□ 0.36
CBX5-206ENST00000618078 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
CBX5-206ENST00000618078 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
CBX5-206ENST00000618078 TDRD3Q9H7E2 651 aaKnown RBP17.29■□□□□ 0.36
CBX5-206ENST00000618078 COL4A5P29400 1685 aa17.29■□□□□ 0.36
CBX5-206ENST00000618078 GOLGA6L6A8MZA4 724 aa17.29■□□□□ 0.36
CBX5-206ENST00000618078 LRMPQ12912 555 aa17.29■□□□□ 0.36
CBX5-206ENST00000618078 ZSCAN29Q8IWY8 852 aaPredicted RBP17.29■□□□□ 0.36
CBX5-206ENST00000618078 MYO3BQ8WXR4 1341 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 SNHG28P0DPA3 235 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 TTBK2Q6IQ55 1244 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 MRIQ9BWK5 157 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 ZMYND12Q9H0C1 365 aa17.28■□□□□ 0.36
CBX5-206ENST00000618078 EHD4Q9H223 541 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms