RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 JDP2Q8WYK2 163 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 EEF2KMTQ96G04 330 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 ALS2CR12Q96Q35 445 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 MTA3Q9BTC8 594 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 DBNDD1Q9H9R9 158 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 AFF2P51816 1311 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 PPIP5K2O43314 1243 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 GTPBP6O43824 516 aaPredicted RBP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 CDC25BP30305 580 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 KRT83P78385 493 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 BMS1Q14692 1282 aaKnown RBP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 ARID5BQ14865 1188 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 SPATA1Q5VX52 437 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 RESP18Q5W5W9 173 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 PUF60Q9UHX1 559 aaKnown RBP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 HPS5Q9UPZ3 1129 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 NWD1Q149M9 1564 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 WDHD1O75717 1129 aaPredicted RBP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 LONP1P36776 959 aaKnown RBP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 MATR3P43243 847 aaKnown RBP eCLIP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 CDK8P49336 464 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 RAD51AP2Q09MP3 1159 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 STXBP4Q6ZWJ1 553 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 CCDC65Q8IXS2 484 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 EHBP1Q8NDI1 1231 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 SLC4A9Q96Q91 983 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 FMN2Q9NZ56 1722 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 KIF13AQ9H1H9 1805 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 NOP2P46087 812 aaKnown RBP14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 KIF5AQ12840 1032 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 VPS72Q15906 364 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 BARGINQ6ZT62 677 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 ERO1AQ96HE7 468 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 GSDMAQ96QA5 445 aa14.8□□□□□ -0.04
PPP4R3B-206ENST00000616407 GOLGA8FQ08AF8 430 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 GOLGA8DPQ0D2H9 430 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 GJD4Q96KN9 370 aaPredicted RBP14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 NAP1L4Q99733 375 aaKnown RBP14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 CTAGE15A4D2H0 777 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 KRT86O43790 486 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 CTAGE8P0CG41 777 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 PPP1R2P41236 205 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 CTAGE6Q86UF2 777 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 CTAGE4Q8IX94 777 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 FLAD1Q8NFF5 587 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 NEK11Q8NG66 645 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 CPVLQ9H3G5 476 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 SERPINB13Q9UIV8 391 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 RGPD8O14715 1765 aaPredicted RBP14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 PIGSQ96S52 555 aa14.79□□□□□ -0.04
PPP4R3B-206ENST00000616407 KDM4FA0A1W2PPD8 638 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 RPN1P04843 607 aaKnown RBP14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 CERKLQ49MI3 558 aaPredicted RBP14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 SHC4Q6S5L8 630 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 CRACR2AQ9BSW2 395 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 GLT8D2Q9H1C3 349 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 PSTPIP2Q9H939 334 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 TBC1D7Q9P0N9 293 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 COL9A3Q14050 684 aaPredicted RBP14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 HERC4Q5GLZ8 1057 aaPredicted RBP14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 DESI2Q9BSY9 194 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 BCL2L12Q9HB09 334 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 ARHGEF10LQ9HCE6 1279 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 USP8P40818 1118 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 MORC3Q14149 939 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 LRP10Q7Z4F1 713 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 CARD6Q9BX69 1037 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 CCDC122Q5T0U0 273 aa14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 SAMSN1Q9NSI8 373 aaKnown RBP14.78□□□□□ -0.04
PPP4R3B-206ENST00000616407 CHMP2AO43633 222 aa14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 ERCC5P28715 1186 aaPredicted RBP14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 RC3H1Q5TC82 1133 aaKnown RBP14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 NCAPH2Q6IBW4 605 aa14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 TMC4Q7Z404 712 aa14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 GPIHBP1Q8IV16 184 aa14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 ARFGAP3Q9NP61 516 aa14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 PKD2L1Q9P0L9 805 aa14.77□□□□□ -0.04
PPP4R3B-206ENST00000616407 KCNJ18B7U540 433 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 FAM13AO94988 1023 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 FGFR2P21802 821 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 RCAN1P53805 252 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 TRIM14Q14142 442 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 KCNJ12Q14500 433 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 COA7Q96BR5 231 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 BCL9O00512 1426 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 ERICH4A6NGS2 130 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 CASP1P29466 404 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 SLC16A2P36021 539 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 CETN1Q12798 172 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 TMEM47Q9BQJ4 181 aa14.77□□□□□ -0.05
PPP4R3B-206ENST00000616407 CFBP00751 764 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 MMP10P09238 476 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 DLGAP5Q15398 846 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 CYP26C1Q6V0L0 522 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 TMTC1Q8IUR5 882 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 PCDHA12Q9UN75 941 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 TMCO5BA8MYB1 307 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 POTEB2H3BUK9 544 aa14.76□□□□□ -0.05
PPP4R3B-206ENST00000616407 EVCP57679 992 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms