RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	GREB1L	Q9C091	1923 aa	Predicted RBP	13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	GSG1L2	A8MUP6	293 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	SEPT4	O43236	478 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	ZFY	P08048	801 aa	Predicted RBP	13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	FCER1A	P12319	257 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	SYN1	P17600	705 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	RIOX2	Q8IUF8	465 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	TDH	Q8IZJ6	230 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	ARRDC4	Q8NCT1	418 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	APPBP2	Q92624	585 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	LRCH3	Q96II8	777 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	NRBP1	Q9UHY1	535 aa		13.35	□□□□□ -0.27
CBWD1-222	ENST00000613508	VWA5A	O00534	786 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	RNF113A	O15541	343 aa	Known RBP	13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	RASA1	P20936	1047 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	CNGA1	P29973	690 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	COPB2	P35606	906 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	PLS1	Q14651	629 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	NCAPG2	Q86XI2	1143 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	REPS2	Q8NFH8	660 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	OSBP2	Q969R2	916 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	MAML3	Q96JK9	1138 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	NYAP2	Q9P242	653 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	ZNF214	Q9UL59	606 aa	Predicted RBP	13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	PPP1R9A	Q9ULJ8	1098 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	SYNPO2	Q9UMS6	1093 aa		13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	DIS3	Q9Y2L1	958 aa	Known RBP	13.34	□□□□□ -0.27
CBWD1-222	ENST00000613508	GNAT2	P19087	354 aa		13.33	□□□□□ -0.28
CBWD1-222	ENST00000613508	UBE2O	Q9C0C9	1292 aa	Known RBP	13.33	□□□□□ -0.28
CBWD1-222	ENST00000613508	FBXO28	Q9NVF7	368 aa		13.33	□□□□□ -0.28
CBWD1-222	ENST00000613508	TTC41P	Q6P2S7	1318 aa		13.33	□□□□□ -0.28
CBWD1-222	ENST00000613508	IGKV6D-41	A0A0C4DH26	115 aa		13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	STAT3	P40763	770 aa		13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	SNX17	Q15036	470 aa		13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	FAM83B	Q5T0W9	1011 aa		13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	C1orf53	Q5VUE5	145 aa		13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	MKL1	Q969V6	931 aa		13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	ZNF287	Q9HBT7	754 aa		13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.32	□□□□□ -0.28
CBWD1-222	ENST00000613508		F5H6K3	240 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	ATP2A1	O14983	1001 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	GPAA1	O43292	621 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	KLRC3	Q07444	240 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	KCTD2	Q14681	263 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	ZNF792	Q3KQV3	632 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	MMP19	Q99542	508 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	SLF1	Q9BQI6	1058 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	TINF2	Q9BSI4	451 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	TEX13B	Q9BXU2	312 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	MKNK2	Q9HBH9	465 aa		13.31	□□□□□ -0.28
CBWD1-222	ENST00000613508	COL11A1	P12107	1806 aa	Predicted RBP	13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	PATL2	C9JE40	543 aa	Known RBP	13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	KBTBD13	C9JR72	458 aa		13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	NDUFB10	O96000	172 aa		13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	PRAMEF19	Q5SWL8	479 aa		13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	GJC2	Q5T442	439 aa	Predicted RBP	13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	TSHZ3	Q63HK5	1081 aa		13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	MSL3	Q8N5Y2	521 aa	Known RBP	13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	PRPF38A	Q8NAV1	312 aa	Known RBP	13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	PI4K2B	Q8TCG2	481 aa		13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	UNC80	Q8N2C7	3258 aa		13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	PLIN4	Q96Q06	1357 aa		13.3	□□□□□ -0.28
CBWD1-222	ENST00000613508	DNAJC25-GNG10	A0A024R161	153 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	MINDY4B	A8MYZ0	360 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508		M0R2C6	588 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	ERC2	O15083	957 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	PGK2	P07205	417 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	ATN1	P54259	1190 aa	Predicted RBP	13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	RTP1	P59025	263 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	MDM2	Q00987	491 aa	Predicted RBP	13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	LRRC41	Q15345	812 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	SLC39A5	Q6ZMH5	540 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	GMCL1P1	Q8NEA9	526 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	MTMR4	Q9NYA4	1195 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	PHF24	Q9UPV7	400 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	PCDHB15	Q9Y5E8	787 aa		13.29	□□□□□ -0.28
CBWD1-222	ENST00000613508	TTLL1	O95922	423 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	RARB	P10826	455 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	TDO2	P48775	406 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	FAM47A	Q5JRC9	791 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	ZMYM1	Q5SVZ6	1142 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	MAMDC4	Q6UXC1	1216 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	IFNL3	Q8IZI9	196 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	DEFB123	Q8N688	67 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	NUP88	Q99567	741 aa	Predicted RBP	13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	NACAP1	Q9BZK3	213 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	XPNPEP3	Q9NQH7	507 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	CLIP2	Q9UDT6	1046 aa		13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.28	□□□□□ -0.28
CBWD1-222	ENST00000613508	APP	P05067	770 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	ADCYAP1R1	P41586	468 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms