RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CRAMP1Q96RY5 1269 aa18.75■□□□□ 0.59
CNOT3-208ENST00000613073 HPSEQ9Y251 543 aa18.75■□□□□ 0.59
CNOT3-208ENST00000613073 CUTAO60888 179 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 PPP4CP60510 307 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 GTF2IP78347 998 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 NOM1Q5C9Z4 860 aaKnown RBP18.74■□□□□ 0.59
CNOT3-208ENST00000613073 ARMCX5Q6P1M9 558 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 TMED8Q6PL24 325 aaPredicted RBP18.74■□□□□ 0.59
CNOT3-208ENST00000613073 AMOTL1Q8IY63 956 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 KAT14Q9H8E8 782 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 CNTNAP5Q8WYK1 1306 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 F8W031 263 aaPredicted RBP18.74■□□□□ 0.59
CNOT3-208ENST00000613073 TEX11Q8IYF3 940 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 PHF20Q9BVI0 1012 aa18.74■□□□□ 0.59
CNOT3-208ENST00000613073 TSPY3P0CV98 308 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 TSPY8P0CW00 308 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 KRT2P35908 639 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 LONRF3Q496Y0 759 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 ZNF444Q8N0Y2 327 aaPredicted RBP18.73■□□□□ 0.59
CNOT3-208ENST00000613073 KCNH3Q9ULD8 1083 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 SFPQP23246 707 aaKnown RBP eCLIP18.73■□□□□ 0.59
CNOT3-208ENST00000613073 PNOCQ13519 176 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 SMC1AQ14683 1233 aaKnown RBP18.73■□□□□ 0.59
CNOT3-208ENST00000613073 PTPN21Q16825 1174 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 STX8Q9UNK0 236 aa18.73■□□□□ 0.59
CNOT3-208ENST00000613073 PNMA1Q8ND90 353 aa18.72■□□□□ 0.59
CNOT3-208ENST00000613073 XPO4Q9C0E2 1151 aaKnown RBP18.72■□□□□ 0.59
CNOT3-208ENST00000613073 IFNKQ9P0W0 207 aa18.72■□□□□ 0.59
CNOT3-208ENST00000613073 GPS2Q13227 327 aa18.72■□□□□ 0.59
CNOT3-208ENST00000613073 STAG2Q8N3U4 1231 aa18.72■□□□□ 0.59
CNOT3-208ENST00000613073 NAT10Q9H0A0 1025 aaKnown RBP18.72■□□□□ 0.59
CNOT3-208ENST00000613073 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
CNOT3-208ENST00000613073 KLRG2A4D1S0 409 aaPredicted RBP18.71■□□□□ 0.59
CNOT3-208ENST00000613073 WNT7AO00755 349 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 GSDMDP57764 484 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 DLEC1Q9Y238 1755 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 GPR75-ASB3A0A0A6YYF3 556 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 TBC1D8O95759 1140 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 SP8Q8IXZ3 490 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 PDILTQ8N807 584 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 CNNM3Q8NE01 707 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 MXD3Q9BW11 206 aa18.71■□□□□ 0.59
CNOT3-208ENST00000613073 FANCGO15287 622 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 FOXN1O15353 648 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 SRGNP10124 158 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 GOLGA8FQ08AF8 430 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 GOLGA8DPQ0D2H9 430 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 DOK7Q18PE1 504 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 ADAMTS3O15072 1205 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 MMP10P09238 476 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 PTPREP23469 700 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 NOP2P46087 812 aaKnown RBP18.7■□□□□ 0.58
CNOT3-208ENST00000613073 USP49Q70CQ1 688 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 ATP6V0A2Q9Y487 856 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 SCG2P13521 617 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 NLRP5P59047 1200 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 NPY5RQ15761 445 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 RASGRP2Q7LDG7 609 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
CNOT3-208ENST00000613073 FLT1P17948 1338 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 TRIM75PA6NK02 468 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 POLR2DO15514 142 aaKnown RBP18.69■□□□□ 0.58
CNOT3-208ENST00000613073 RASA1P20936 1047 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 CASQ1P31415 396 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 KIF5BP33176 963 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 GTF2A1P52655 376 aaPredicted RBP18.69■□□□□ 0.58
CNOT3-208ENST00000613073 RHBDL3P58872 404 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 NLRP12P59046 1061 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 ETF1P62495 437 aaKnown RBP18.69■□□□□ 0.58
CNOT3-208ENST00000613073 METTL16Q86W50 562 aaKnown RBP18.69■□□□□ 0.58
CNOT3-208ENST00000613073 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.582e-6■■■□□ 15.9
CNOT3-208ENST00000613073 AKT1S1Q96B36 256 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 ZC3H12CQ9C0D7 883 aaKnown RBP18.69■□□□□ 0.58
CNOT3-208ENST00000613073 PICALMQ13492 652 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 ZNF174Q15697 407 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 CSRNP2Q9H175 543 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 EFCC1Q9HA90 598 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 BRMS1Q9HCU9 246 aa18.69■□□□□ 0.58
CNOT3-208ENST00000613073 FAM237AA0A1B0GTK4 181 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 TADA3O75528 432 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 CDK8P49336 464 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 FOXP4Q8IVH2 680 aaPredicted RBP18.68■□□□□ 0.58
CNOT3-208ENST00000613073 TBC1D22AQ8WUA7 517 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 CEP131Q9UPN4 1083 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 RRP15Q9Y3B9 282 aaKnown RBP18.68■□□□□ 0.58
CNOT3-208ENST00000613073 ANKRD65E5RJM6 399 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 GOLGA8HP0CJ92 632 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 REXO1L1PQ8IX06 675 aa18.68■□□□□ 0.58
CNOT3-208ENST00000613073 OSBPL5Q9H0X9 879 aaPredicted RBP18.68■□□□□ 0.58
CNOT3-208ENST00000613073 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 ROBO3Q96MS0 1386 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 PFKFB3Q16875 520 aaPredicted RBP18.67■□□□□ 0.58
CNOT3-208ENST00000613073 CC2D1AQ6P1N0 951 aaPredicted RBP18.67■□□□□ 0.58
CNOT3-208ENST00000613073 SRPRBQ9Y5M8 271 aaKnown RBP18.67■□□□□ 0.58
CNOT3-208ENST00000613073 DPP8Q6V1X1 898 aaPredicted RBP18.67■□□□□ 0.58
CNOT3-208ENST00000613073 PIK3AP1Q6ZUJ8 805 aa18.67■□□□□ 0.58
CNOT3-208ENST00000613073 SRLQ86TD4 932 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms