RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 GABPAQ06546 454 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 C16orf59Q7L2K0 433 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 ANKRD33Q7Z3H0 272 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 RNF180Q86T96 592 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 TTC6Q86TZ1 520 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 ZNF512BQ96KM6 892 aaPredicted RBP16.71■□□□□ 0.27
LINC00116-203ENST00000611969 GAS2L1Q99501 681 aaPredicted RBP16.71■□□□□ 0.27
LINC00116-203ENST00000611969 GPR108Q9NPR9 543 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 SLC5A4Q9NY91 659 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 HOXC10Q9NYD6 342 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 TBX21Q9UL17 535 aa16.71■□□□□ 0.27
LINC00116-203ENST00000611969 XIRP2A4UGR9 3374 aa16.71■□□□□ 0.26
LINC00116-203ENST00000611969 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
LINC00116-203ENST00000611969 FLOT1O75955 427 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 MS4A1P11836 297 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 DSG3P32926 999 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 CCDC85BQ15834 202 aaPredicted RBP16.7■□□□□ 0.26
LINC00116-203ENST00000611969 AKNAD1Q5T1N1 836 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
LINC00116-203ENST00000611969 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
LINC00116-203ENST00000611969 SPICE1Q8N0Z3 855 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 SLC44A5Q8NCS7 719 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 FAM122AQ96E09 287 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 NECAB3Q96P71 396 aaPredicted RBP16.7■□□□□ 0.26
LINC00116-203ENST00000611969 UHRF1Q96T88 793 aaPredicted RBP16.7■□□□□ 0.26
LINC00116-203ENST00000611969 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
LINC00116-203ENST00000611969 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
LINC00116-203ENST00000611969 ZNF865P0CJ78 1059 aaPredicted RBP16.69■□□□□ 0.26
LINC00116-203ENST00000611969 FCER1AP12319 257 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 ACLYP53396 1101 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 RASIP1Q5U651 963 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 MB21D1Q8N884 522 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 TINF2Q9BSI4 451 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 STARD7Q9NQZ5 370 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 NRBP1Q9UHY1 535 aa16.69■□□□□ 0.26
LINC00116-203ENST00000611969 MYADML2A6NDP7 307 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 IGSF3O75054 1194 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 TIMP1P01033 207 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
LINC00116-203ENST00000611969 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 OS9Q13438 667 aaPredicted RBP16.68■□□□□ 0.26
LINC00116-203ENST00000611969 POLA2Q14181 598 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 ZNF792Q3KQV3 632 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 TMEM240Q5SV17 173 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 CCDC129Q6ZRS4 1044 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 TOX2Q96NM4 488 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 MMP19Q99542 508 aa16.68■□□□□ 0.26
LINC00116-203ENST00000611969 DCDC2CA8MYV0 355 aa16.67■□□□□ 0.26
LINC00116-203ENST00000611969 POLR3DP05423 398 aaPredicted RBP16.67■□□□□ 0.26
LINC00116-203ENST00000611969 CYP2D6P10635 497 aa16.67■□□□□ 0.26
LINC00116-203ENST00000611969 AKR1A1P14550 325 aa16.67■□□□□ 0.26
LINC00116-203ENST00000611969 MRPS5P82675 430 aaKnown RBP16.67■□□□□ 0.26
LINC00116-203ENST00000611969 MFSD5Q6N075 450 aa16.67■□□□□ 0.26
LINC00116-203ENST00000611969 CERS3Q8IU89 383 aa16.67■□□□□ 0.26
LINC00116-203ENST00000611969 SIAH1Q8IUQ4 282 aa16.67■□□□□ 0.26
LINC00116-203ENST00000611969 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
LINC00116-203ENST00000611969 TRANK1O15050 2925 aa16.67■□□□□ 0.26
LINC00116-203ENST00000611969 ACRP10323 421 aa16.66■□□□□ 0.26
LINC00116-203ENST00000611969 CSF2RAP15509 400 aa16.66■□□□□ 0.26
LINC00116-203ENST00000611969 CCSAPQ6IQ19 270 aaPredicted RBP16.66■□□□□ 0.26
LINC00116-203ENST00000611969 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
LINC00116-203ENST00000611969 FBXO28Q9NVF7 368 aa16.66■□□□□ 0.26
LINC00116-203ENST00000611969 LRRC37A2A6NM11 1700 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 GREB1LQ9C091 1923 aaPredicted RBP16.65■□□□□ 0.26
LINC00116-203ENST00000611969 ADCY6O43306 1168 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 IGFBP4P22692 258 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 PPIGQ13427 754 aaKnown RBP eCLIP16.65■□□□□ 0.26
LINC00116-203ENST00000611969 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 KLHDC9Q8NEP7 349 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 EAF2Q96CJ1 260 aaPredicted RBP16.65■□□□□ 0.26
LINC00116-203ENST00000611969 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 TSEN34Q9BSV6 310 aaKnown RBP16.65■□□□□ 0.26
LINC00116-203ENST00000611969 PPP1R12CQ9BZL4 782 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 VCPKMTQ9H867 229 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 MCM9Q9NXL9 1143 aa16.65■□□□□ 0.26
LINC00116-203ENST00000611969 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
LINC00116-203ENST00000611969 SLC25A27O95847 323 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 AKR1B1P15121 316 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
LINC00116-203ENST00000611969 ICA1Q05084 483 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 KCTD2Q14681 263 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 KCNA10Q16322 511 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 ZNF365Q70YC5 407 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 RIOX2Q8IUF8 465 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 ITPRIPQ8IWB1 547 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 NUP133Q8WUM0 1156 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 SDR42E1Q8WUS8 393 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 NKX2-4Q9H2Z4 354 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
LINC00116-203ENST00000611969 ADAMTS5Q9UNA0 930 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 YBX2Q9Y2T7 364 aaKnown RBP16.64■□□□□ 0.25
LINC00116-203ENST00000611969 TMX2Q9Y320 296 aa16.64■□□□□ 0.25
LINC00116-203ENST00000611969 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
LINC00116-203ENST00000611969 MOXD2PA6NHM9 499 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms