RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 VIMP08670 466 aaKnown RBP6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 FDX1P10109 184 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 RBL2Q08999 1139 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 GPR162Q16538 588 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 NFE2Q16621 373 aaPredicted RBP6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 SYT10Q6XYQ8 523 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 ARHGEF18Q6ZSZ5 1173 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 TMC6Q7Z403 805 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 PIBF1Q8WXW3 757 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 CTNNBL1Q8WYA6 563 aaPredicted RBP6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 ATP6V1E2Q96A05 226 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 VCX3BQ9H321 246 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 DDX21Q9NR30 783 aaKnown RBP eCLIP6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 SLC5A4Q9NY91 659 aa6.57□□□□□ -1.36
COL4A3BP-207ENST00000604926 NUP188Q5SRE5 1749 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 MYO5BQ9ULV0 1848 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 ARPC4-TTLL3A0A0A6YYG9 625 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SYNDIG1LA6NDD5 238 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SPDYE2BA6NHP3 402 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SPDYE5A6NIY4 337 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 GOLGA6L19H0YKK7 550 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SPDYE6P0CI01 402 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 PRKAR2BP31323 418 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 FOXK1P85037 733 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 TTLL12Q14166 644 aaPredicted RBP6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SPDYE2Q495Y8 402 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SH2D4BQ5SQS7 431 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 EMC10Q5UCC4 262 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 B4GALNT3Q6L9W6 998 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SLC44A2Q8IWA5 706 aaPredicted RBP6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 MTMR14Q8NCE2 650 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SLKQ9H2G2 1235 aaPredicted RBP6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 HPS4Q9NQG7 708 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 STK39Q9UEW8 545 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 ZFYVE9O95405 1425 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 ROR1Q01973 937 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 IMMTQ16891 758 aaKnown RBP6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 BEND5Q7L4P6 421 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 NANOGNBQ7Z5D8 188 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 OSTM1Q86WC4 334 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 CCDC144CPQ8IYA2 1237 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 NFATC2IPQ8NCF5 419 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 ANKRD7Q92527 254 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 DBNDD1Q9H9R9 158 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 SMYD2Q9NRG4 433 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 PGAP2Q9UHJ9 254 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 FBXO10Q9UK96 956 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 IPPQ9Y573 584 aa6.56□□□□□ -1.36
COL4A3BP-207ENST00000604926 IQCA1LA6NCM1 817 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 ENO4A6NNW6 628 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 KDM1AO60341 852 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 REC8O95072 547 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 HCLS1P14317 486 aaPredicted RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 LMOD1P29536 600 aaPredicted RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 NEK3P51956 506 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 GABREP78334 506 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 MRPS35P82673 323 aaKnown RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 DALRD3Q5D0E6 543 aaKnown RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 IL31Q6EBC2 164 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 METTL3Q86U44 580 aaKnown RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 SEMA4AQ9H3S1 761 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 NDUFB5O43674 189 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 KPNA6O60684 536 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 PARP1P09874 1014 aaKnown RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 ENDOUP21128 410 aaKnown RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 GPS2Q13227 327 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 PDE3BQ13370 1112 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 LRP8Q14114 963 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 MUM1L1Q5H9M0 696 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 SMYD5Q6GMV2 418 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 IQCA1Q86XH1 822 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 GIMAP7Q8NHV1 300 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 PANK3Q9H999 370 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 HOMER2Q9NSB8 354 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 STAP2Q9UGK3 403 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 TIMM22Q9Y584 194 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 DLC1Q96QB1 1528 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 LSM1O15116 133 aaKnown RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 HSPA1LP34931 641 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 NOS2P35228 1153 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 SLC4A3P48751 1232 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 RRP1P56182 461 aaKnown RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 MLLT1Q03111 559 aaPredicted RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 PROSER3Q2NL68 480 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 HS1BP3Q53T59 392 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 HIBCHQ6NVY1 386 aaPredicted RBP6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 ERC1Q8IUD2 1116 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 B4GALNT2Q8NHY0 566 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 STK32AQ8WU08 396 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 LAMP5Q9UJQ1 280 aa6.55□□□□□ -1.36
COL4A3BP-207ENST00000604926 H7C1W4 665 aa6.54□□□□□ -1.36
COL4A3BP-207ENST00000604926 PRPF3O43395 683 aaKnown RBP6.54□□□□□ -1.36
COL4A3BP-207ENST00000604926 NMT2O60551 498 aa6.54□□□□□ -1.36
COL4A3BP-207ENST00000604926 CD9P21926 228 aa6.54□□□□□ -1.36
COL4A3BP-207ENST00000604926 CYP2C19P33261 490 aa6.54□□□□□ -1.36
COL4A3BP-207ENST00000604926 LAMB3Q13751 1172 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms