RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ECHDC1Q9NTX5 307 aa21.38■■□□□ 1.01
SHKBP1-227ENST00000602011 COBLO75128 1261 aa21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 EEF2P13639 858 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 KIAA1755Q5JYT7 1200 aa21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 GJC2Q5T442 439 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 CTR9Q6PD62 1173 aa21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 RIOX2Q8IUF8 465 aa21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 SPICE1Q8N0Z3 855 aa21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 ATG4CQ96DT6 458 aa21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 GUCD1Q96NT3 240 aa21.37■■□□□ 1.01
SHKBP1-227ENST00000602011 ZFYP08048 801 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 STAT3P40763 770 aa21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 RTP1P59025 263 aa21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 KCTD2Q14681 263 aa21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 C1orf53Q5VUE5 145 aa21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 FAM109BQ6ICB4 259 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 MAML3Q96JK9 1138 aa21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
SHKBP1-227ENST00000602011 GNAT2P19087 354 aa21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 TMEM132BQ14DG7 1078 aa21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 SLC39A5Q6ZMH5 540 aa21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 MSL3Q8N5Y2 521 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 STRBPQ96SI9 672 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 PUS7LQ9H0K6 701 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 PPP1R9AQ9ULJ8 1098 aa21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 ATP11BQ9Y2G3 1177 aa21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 NAV1Q8NEY1 1877 aa21.35■■□□□ 1.01
SHKBP1-227ENST00000602011 POTEB2H3BUK9 544 aa21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 VWA5AO00534 786 aa21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 MYCNP04198 464 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 KBTBD3Q8NAB2 608 aa21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 MMP19Q99542 508 aa21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 MKNK2Q9HBH9 465 aa21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 NYAP2Q9P242 653 aa21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 SYNPO2Q9UMS6 1093 aa21.34■■□□□ 1.01
SHKBP1-227ENST00000602011 SNX17Q15036 470 aa21.33■■□□□ 1.01
SHKBP1-227ENST00000602011 PRAMEF19Q5SWL8 479 aa21.33■■□□□ 1.01
SHKBP1-227ENST00000602011 CLEC10AQ8IUN9 316 aa21.33■■□□□ 1.01
SHKBP1-227ENST00000602011 COL25A1Q9BXS0 654 aaPredicted RBP21.33■■□□□ 1.01
SHKBP1-227ENST00000602011 ZNF236Q9UL36 1845 aa21.33■■□□□ 1.01
SHKBP1-227ENST00000602011 CYP2D7A0A087X1C5 515 aa21.32■■□□□ 1
SHKBP1-227ENST00000602011 RARBP10826 455 aa21.32■■□□□ 1
SHKBP1-227ENST00000602011 RNF180Q86T96 592 aa21.32■■□□□ 1
SHKBP1-227ENST00000602011 PRPF38AQ8NAV1 312 aaKnown RBP21.32■■□□□ 1
SHKBP1-227ENST00000602011 APPBP2Q92624 585 aa21.32■■□□□ 1
SHKBP1-227ENST00000602011 TINF2Q9BSI4 451 aa21.32■■□□□ 1
SHKBP1-227ENST00000602011 DCTPP1Q9H773 170 aa21.32■■□□□ 1
SHKBP1-227ENST00000602011 LTBP2Q14767 1821 aa21.32■■□□□ 1
SHKBP1-227ENST00000602011 SLFNL1Q499Z3 407 aa21.31■■□□□ 1
SHKBP1-227ENST00000602011 C9orf50Q5SZB4 431 aa21.31■■□□□ 1
SHKBP1-227ENST00000602011 SAMD1Q6SPF0 538 aaPredicted RBP21.31■■□□□ 1
SHKBP1-227ENST00000602011 PRDM5Q9NQX1 630 aaPredicted RBP21.31■■□□□ 1
SHKBP1-227ENST00000602011 RLFQ13129 1914 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 GSG1L2A8MUP6 293 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 SMIM22K7EJ46 135 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 ATP2A1O14983 1001 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 LRRC41Q15345 812 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 SHHQ15465 462 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 ZNF792Q3KQV3 632 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.3■■□□□ 1
SHKBP1-227ENST00000602011 ZNF444Q8N0Y2 327 aaPredicted RBP21.3■■□□□ 1
SHKBP1-227ENST00000602011 MKL1Q969V6 931 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 SLF1Q9BQI6 1058 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 TEX13BQ9BXU2 312 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 ZNF214Q9UL59 606 aaPredicted RBP21.3■■□□□ 1
SHKBP1-227ENST00000602011 CNPY2Q9Y2B0 182 aa21.3■■□□□ 1
SHKBP1-227ENST00000602011 EYSQ5T1H1 3165 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 F5H6K3 240 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 RNF113AO15541 343 aaKnown RBP21.29■■□□□ 1
SHKBP1-227ENST00000602011 FDX1P10109 184 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 KLRC3Q07444 240 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 TRIM60Q495X7 471 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 FERMT2Q96AC1 680 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.29■■□□□ 1
SHKBP1-227ENST00000602011 FBXO28Q9NVF7 368 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 PHF24Q9UPV7 400 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 TACC3Q9Y6A5 838 aa21.29■■□□□ 1
SHKBP1-227ENST00000602011 PATL2C9JE40 543 aaKnown RBP21.28■■□□□ 1
SHKBP1-227ENST00000602011 ZBED4O75132 1171 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 AKR1A1P14550 325 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 RASA1P20936 1047 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 ADCYAP1R1P41586 468 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 PPP4R3BQ5MIZ7 849 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 SH3RF1Q7Z6J0 888 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 REPS2Q8NFH8 660 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 BADQ92934 168 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 TSEN34Q9BSV6 310 aaKnown RBP21.28■■□□□ 1
SHKBP1-227ENST00000602011 NACAP1Q9BZK3 213 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 XPNPEP3Q9NQH7 507 aa21.28■■□□□ 1
SHKBP1-227ENST00000602011 CTDP1Q9Y5B0 961 aaPredicted RBP21.28■■□□□ 1
SHKBP1-227ENST00000602011 A0A0G2JMZ2 1700 aa21.27■■□□□ 1
SHKBP1-227ENST00000602011 ROBO3Q96MS0 1386 aa21.27■■□□□ 1
SHKBP1-227ENST00000602011 MINDY4BA8MYZ0 360 aa21.27■■□□□ 1
SHKBP1-227ENST00000602011 ERC2O15083 957 aa21.27■■□□□ 1
SHKBP1-227ENST00000602011 RAD21O60216 631 aa21.27■■□□□ 1
SHKBP1-227ENST00000602011 SMARCA5O60264 1052 aaPredicted RBP21.27■■□□□ 1
SHKBP1-227ENST00000602011 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.27■■□□□ 1
SHKBP1-227ENST00000602011 ZNF467Q7Z7K2 595 aaPredicted RBP21.27■■□□□ 1
SHKBP1-227ENST00000602011 DDX11Q96FC9 970 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms