RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MINDY4BA8MYZ0 360 aa20.33■□□□□ 0.85
SCAF1-204ENST00000601038 GPAA1O43292 621 aa20.33■□□□□ 0.85
SCAF1-204ENST00000601038 FCER1AP12319 257 aa20.33■□□□□ 0.85
SCAF1-204ENST00000601038 MAGEA10P43363 369 aaPredicted RBP20.33■□□□□ 0.85
SCAF1-204ENST00000601038 SENP6Q9GZR1 1112 aaPredicted RBP20.33■□□□□ 0.85
SCAF1-204ENST00000601038 FBXO28Q9NVF7 368 aa20.33■□□□□ 0.85
SCAF1-204ENST00000601038 NYAP2Q9P242 653 aa20.33■□□□□ 0.85
SCAF1-204ENST00000601038 PPP1R9AQ9ULJ8 1098 aa20.33■□□□□ 0.85
SCAF1-204ENST00000601038 PCDHB15Q9Y5E8 787 aa20.33■□□□□ 0.85
SCAF1-204ENST00000601038 ROBO3Q96MS0 1386 aa20.33■□□□□ 0.84
SCAF1-204ENST00000601038 RANBP2P49792 3224 aaKnown RBP20.32■□□□□ 0.84
SCAF1-204ENST00000601038 PARP14Q460N5 1801 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 FRMPD3Q5JV73 1810 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 DNM1LO00429 736 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 VWA5AO00534 786 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 ERC2O15083 957 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 RAD21O60216 631 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 FAM83BQ5T0W9 1011 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 RIOX2Q8IUF8 465 aa20.32■□□□□ 0.84
SCAF1-204ENST00000601038 PATL2C9JE40 543 aaKnown RBP20.31■□□□□ 0.84
SCAF1-204ENST00000601038 SOX1O00570 391 aaPredicted RBP20.31■□□□□ 0.84
SCAF1-204ENST00000601038 SEPT4O43236 478 aa20.31■□□□□ 0.84
SCAF1-204ENST00000601038 STAT3P40763 770 aa20.31■□□□□ 0.84
SCAF1-204ENST00000601038 STK11IPQ8N1F8 1099 aa20.31■□□□□ 0.84
SCAF1-204ENST00000601038 ARRDC4Q8NCT1 418 aa20.31■□□□□ 0.84
SCAF1-204ENST00000601038 MAML3Q96JK9 1138 aa20.31■□□□□ 0.84
SCAF1-204ENST00000601038 ZNF287Q9HBT7 754 aa20.31■□□□□ 0.84
SCAF1-204ENST00000601038 EPB41L4AQ9HCS5 686 aaPredicted RBP20.31■□□□□ 0.84
SCAF1-204ENST00000601038 GREB1LQ9C091 1923 aaPredicted RBP20.3■□□□□ 0.84
SCAF1-204ENST00000601038 M0R2C6 588 aa20.3■□□□□ 0.84
SCAF1-204ENST00000601038 APPP05067 770 aa20.3■□□□□ 0.84
SCAF1-204ENST00000601038 TDO2P48775 406 aa20.3■□□□□ 0.84
SCAF1-204ENST00000601038 ZNF444Q8N0Y2 327 aaPredicted RBP20.3■□□□□ 0.84
SCAF1-204ENST00000601038 PI4K2BQ8TCG2 481 aa20.3■□□□□ 0.84
SCAF1-204ENST00000601038 MMP19Q99542 508 aa20.3■□□□□ 0.84
SCAF1-204ENST00000601038 ZNF214Q9UL59 606 aaPredicted RBP20.3■□□□□ 0.84
SCAF1-204ENST00000601038 ZNFX1Q9P2E3 1918 aaKnown RBP20.29■□□□□ 0.84
SCAF1-204ENST00000601038 F5H6K3 240 aa20.29■□□□□ 0.84
SCAF1-204ENST00000601038 COPB2P35606 906 aa20.29■□□□□ 0.84
SCAF1-204ENST00000601038 KLRC3Q07444 240 aa20.29■□□□□ 0.84
SCAF1-204ENST00000601038 PRAMEF19Q5SWL8 479 aa20.29■□□□□ 0.84
SCAF1-204ENST00000601038 IFNL3Q8IZI9 196 aa20.29■□□□□ 0.84
SCAF1-204ENST00000601038 REPS2Q8NFH8 660 aa20.29■□□□□ 0.84
SCAF1-204ENST00000601038 LRCH3Q96II8 777 aa20.29■□□□□ 0.84
SCAF1-204ENST00000601038 DIS3Q9Y2L1 958 aaKnown RBP20.29■□□□□ 0.84
SCAF1-204ENST00000601038 COL11A1P12107 1806 aaPredicted RBP20.29■□□□□ 0.84
SCAF1-204ENST00000601038 IGKV6D-41A0A0C4DH26 115 aa20.28■□□□□ 0.84
SCAF1-204ENST00000601038 KCTD2Q14681 263 aa20.28■□□□□ 0.84
SCAF1-204ENST00000601038 TDHQ8IZJ6 230 aa20.28■□□□□ 0.84
SCAF1-204ENST00000601038 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
SCAF1-204ENST00000601038 SLF1Q9BQI6 1058 aa20.28■□□□□ 0.84
SCAF1-204ENST00000601038 NACAP1Q9BZK3 213 aa20.28■□□□□ 0.84
SCAF1-204ENST00000601038 UBE2OQ9C0C9 1292 aaKnown RBP20.28■□□□□ 0.84
SCAF1-204ENST00000601038 CLIP2Q9UDT6 1046 aa20.28■□□□□ 0.84
SCAF1-204ENST00000601038 NRBP1Q9UHY1 535 aa20.28■□□□□ 0.84
SCAF1-204ENST00000601038 NDUFB10O96000 172 aa20.27■□□□□ 0.84
SCAF1-204ENST00000601038 LRIT3Q3SXY7 679 aa20.27■□□□□ 0.84
SCAF1-204ENST00000601038 GJC2Q5T442 439 aaPredicted RBP20.27■□□□□ 0.84
SCAF1-204ENST00000601038 PRPF38AQ8NAV1 312 aaKnown RBP20.27■□□□□ 0.84
SCAF1-204ENST00000601038 OTUD7AQ8TE49 926 aaPredicted RBP20.27■□□□□ 0.84
SCAF1-204ENST00000601038 MKL1Q969V6 931 aa20.27■□□□□ 0.84
SCAF1-204ENST00000601038 SYNPO2Q9UMS6 1093 aa20.27■□□□□ 0.84
SCAF1-204ENST00000601038 KBTBD13C9JR72 458 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 PRDM1O75626 825 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 PGK2P07205 417 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 MX1P20591 662 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 ATN1P54259 1190 aaPredicted RBP20.26■□□□□ 0.83
SCAF1-204ENST00000601038 ZNF792Q3KQV3 632 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 ZMYM1Q5SVZ6 1142 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 ANO1Q5XXA6 986 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 GPR153Q6NV75 609 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 SEC62Q99442 399 aaKnown RBP20.26■□□□□ 0.83
SCAF1-204ENST00000601038 TINF2Q9BSI4 451 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 FSD1Q9BTV5 496 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 TEX13BQ9BXU2 312 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 MTMR4Q9NYA4 1195 aa20.26■□□□□ 0.83
SCAF1-204ENST00000601038 RRP1P56182 461 aaKnown RBP20.25■□□□□ 0.83
SCAF1-204ENST00000601038 CEP95Q96GE4 821 aa20.25■□□□□ 0.83
SCAF1-204ENST00000601038 SZT2Q5T011 3432 aa20.25■□□□□ 0.83
SCAF1-204ENST00000601038 ATP2A1O14983 1001 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 TTLL1O95922 423 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 SLC3A2P08195 630 aaKnown RBP20.24■□□□□ 0.83
SCAF1-204ENST00000601038 RTP1P59025 263 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 MDM2Q00987 491 aaPredicted RBP20.24■□□□□ 0.83
SCAF1-204ENST00000601038 PDE4BQ07343 736 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 SLC39A5Q6ZMH5 540 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 NEDD1Q8NHV4 660 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 NAPBQ9H115 298 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 SMCHD1A6NHR9 2005 aa20.24■□□□□ 0.83
SCAF1-204ENST00000601038 PPARAQ07869 468 aa20.23■□□□□ 0.83
SCAF1-204ENST00000601038 LRRC41Q15345 812 aa20.23■□□□□ 0.83
SCAF1-204ENST00000601038 FAM47AQ5JRC9 791 aa20.23■□□□□ 0.83
SCAF1-204ENST00000601038 SNRNP48Q6IEG0 339 aaKnown RBP20.23■□□□□ 0.83
SCAF1-204ENST00000601038 GMCL1P1Q8NEA9 526 aa20.23■□□□□ 0.83
SCAF1-204ENST00000601038 LBHD1Q9BQE6 289 aaPredicted RBP20.23■□□□□ 0.83
SCAF1-204ENST00000601038 ZBTB47Q9UFB7 747 aaPredicted RBP20.23■□□□□ 0.83
SCAF1-204ENST00000601038 FEM1BQ9UK73 627 aa20.23■□□□□ 0.83
SCAF1-204ENST00000601038 SALL3Q9BXA9 1300 aa20.23■□□□□ 0.83
SCAF1-204ENST00000601038 PLIN4Q96Q06 1357 aa20.22■□□□□ 0.83
SCAF1-204ENST00000601038 ZBED4O75132 1171 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms