RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SLC3A2P08195 630 aaKnown RBP18.84■□□□□ 0.61
VRK3-221ENST00000600284 ADORA2AP29274 412 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 CCND3P30281 292 aaPredicted RBP18.84■□□□□ 0.61
VRK3-221ENST00000600284 PDE1AP54750 535 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 PLS1Q14651 629 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 LHX8Q68G74 356 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 NPLOC4Q8TAT6 608 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 DIS3LQ8TF46 1054 aaKnown RBP18.84■□□□□ 0.61
VRK3-221ENST00000600284 NAPBQ9H115 298 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
VRK3-221ENST00000600284 C11orf49Q9H6J7 331 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 FLRT1Q9NZU1 646 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 PPP1R9AQ9ULJ8 1098 aa18.84■□□□□ 0.61
VRK3-221ENST00000600284 GREB1LQ9C091 1923 aaPredicted RBP18.83■□□□□ 0.6
VRK3-221ENST00000600284 F5H6K3 240 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 VWA5AO00534 786 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 COPB2P35606 906 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 KLRC3Q07444 240 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 TMEM132BQ14DG7 1078 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 FAM83BQ5T0W9 1011 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 NCAPG2Q86XI2 1143 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 STK11IPQ8N1F8 1099 aa18.83■□□□□ 0.6
VRK3-221ENST00000600284 RAD21O60216 631 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 FCER1AP12319 257 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 PPARAQ07869 468 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 RIOX2Q8IUF8 465 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 NEDD1Q8NHV4 660 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 HELLSQ9NRZ9 838 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 FBXO28Q9NVF7 368 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 CLIP2Q9UDT6 1046 aa18.82■□□□□ 0.6
VRK3-221ENST00000600284 ZNF236Q9UL36 1845 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 PRDM1O75626 825 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 TTLL1O95922 423 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 STAT3P40763 770 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 PPP4R3BQ5MIZ7 849 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 SAMD1Q6SPF0 538 aaPredicted RBP18.81■□□□□ 0.6
VRK3-221ENST00000600284 CHRDL2Q6WN34 429 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 PRPF38AQ8NAV1 312 aaKnown RBP18.81■□□□□ 0.6
VRK3-221ENST00000600284 PCDH10Q9P2E7 1040 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 DDX20Q9UHI6 824 aaKnown RBP18.81■□□□□ 0.6
VRK3-221ENST00000600284 PLIN4Q96Q06 1357 aa18.81■□□□□ 0.6
VRK3-221ENST00000600284 COBLO75128 1261 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 NDUFB10O96000 172 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 TSPY3P0CV98 308 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 TSPY8P0CW00 308 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 COL6A1P12109 1028 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 CYP2C19P33261 490 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 GMCL1P1Q8NEA9 526 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 REPS2Q8NFH8 660 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 CEP95Q96GE4 821 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 SLF1Q9BQI6 1058 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 ZNF214Q9UL59 606 aaPredicted RBP18.8■□□□□ 0.6
VRK3-221ENST00000600284 CEP290O15078 2479 aa18.8■□□□□ 0.6
VRK3-221ENST00000600284 CYBAP13498 195 aa18.79■□□□□ 0.6
VRK3-221ENST00000600284 ALX1Q15699 326 aa18.79■□□□□ 0.6
VRK3-221ENST00000600284 PRO3102Q9H379 93 aa18.79■□□□□ 0.6
VRK3-221ENST00000600284 DIS3Q9Y2L1 958 aaKnown RBP18.79■□□□□ 0.6
VRK3-221ENST00000600284 PARP14Q460N5 1801 aa18.79■□□□□ 0.6
VRK3-221ENST00000600284 ATP2A1O14983 1001 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 FOXP2O15409 715 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 CNGA1P29973 690 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 FXR1P51114 621 aaKnown RBP eCLIP18.78■□□□□ 0.6
VRK3-221ENST00000600284 TFAP4Q01664 338 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 KCTD2Q14681 263 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 MMP19Q99542 508 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 NUP88Q99567 741 aaPredicted RBP18.78■□□□□ 0.6
VRK3-221ENST00000600284 RBM27Q9P2N5 1060 aaKnown RBP18.78■□□□□ 0.6
VRK3-221ENST00000600284 ANAPC4Q9UJX5 808 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 FEM1BQ9UK73 627 aa18.78■□□□□ 0.6
VRK3-221ENST00000600284 PFASO15067 1338 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 A0A1W2PPC1 479 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 MCMDC2Q4G0Z9 681 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 CCDC129Q6ZRS4 1044 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 TRPV1Q8NER1 839 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 MAML3Q96JK9 1138 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 TEX13BQ9BXU2 312 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 LNPKQ9C0E8 428 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 NRBP1Q9UHY1 535 aa18.77■□□□□ 0.6
VRK3-221ENST00000600284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.77■□□□□ 0.6
VRK3-221ENST00000600284 SEPT4O43236 478 aa18.76■□□□□ 0.59
VRK3-221ENST00000600284 ZBED4O75132 1171 aa18.76■□□□□ 0.59
VRK3-221ENST00000600284 FDX1P10109 184 aa18.76■□□□□ 0.59
VRK3-221ENST00000600284 FAM47AQ5JRC9 791 aa18.76■□□□□ 0.59
VRK3-221ENST00000600284 CHD1LQ86WJ1 897 aa18.76■□□□□ 0.59
VRK3-221ENST00000600284 OSBPL3Q9H4L5 887 aa18.76■□□□□ 0.59
VRK3-221ENST00000600284 FGRP09769 529 aa18.75■□□□□ 0.59
VRK3-221ENST00000600284 OAZ1P54368 228 aa18.75■□□□□ 0.59
VRK3-221ENST00000600284 NUCB1Q02818 461 aa18.75■□□□□ 0.59
VRK3-221ENST00000600284 ZNF792Q3KQV3 632 aa18.75■□□□□ 0.59
VRK3-221ENST00000600284 SLFN13Q68D06 897 aa18.75■□□□□ 0.59
VRK3-221ENST00000600284 C7orf61Q8IZ16 206 aa18.75■□□□□ 0.59
VRK3-221ENST00000600284 ARRDC4Q8NCT1 418 aa18.75■□□□□ 0.59
VRK3-221ENST00000600284 CTDP1Q9Y5B0 961 aaPredicted RBP18.75■□□□□ 0.59
VRK3-221ENST00000600284 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
VRK3-221ENST00000600284 TRIM6-TRIM34B2RNG4 842 aa18.74■□□□□ 0.59
VRK3-221ENST00000600284 DNM1LO00429 736 aa18.74■□□□□ 0.59
VRK3-221ENST00000600284 IGHDP01880 384 aa18.74■□□□□ 0.59
VRK3-221ENST00000600284 BMP3P12645 472 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms