RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
EBI3-202ENST00000599339 PRKAG2Q9UGJ0 569 aa17.51■□□□□ 0.39
EBI3-202ENST00000599339 KBTBD13C9JR72 458 aa17.5■□□□□ 0.39
EBI3-202ENST00000599339 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
EBI3-202ENST00000599339 TMEM132BQ14DG7 1078 aa17.5■□□□□ 0.39
EBI3-202ENST00000599339 SBK1Q52WX2 424 aa17.5■□□□□ 0.39
EBI3-202ENST00000599339 STRBPQ96SI9 672 aaKnown RBP17.5■□□□□ 0.39
EBI3-202ENST00000599339 DCTPP1Q9H773 170 aa17.5■□□□□ 0.39
EBI3-202ENST00000599339 MKNK2Q9HBH9 465 aa17.5■□□□□ 0.39
EBI3-202ENST00000599339 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
EBI3-202ENST00000599339 SMIM22K7EJ46 135 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 ATN1P54259 1190 aaPredicted RBP17.49■□□□□ 0.39
EBI3-202ENST00000599339 KCTD2Q14681 263 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 RIOX2Q8IUF8 465 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 APPBP2Q92624 585 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 MAML3Q96JK9 1138 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 MMP19Q99542 508 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 NRBP1Q9UHY1 535 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 ADAMTS5Q9UNA0 930 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 PARP14Q460N5 1801 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 LAMA3Q16787 3333 aa17.49■□□□□ 0.39
EBI3-202ENST00000599339 MINDY4BA8MYZ0 360 aa17.48■□□□□ 0.39
EBI3-202ENST00000599339 RNF113AO15541 343 aaKnown RBP17.48■□□□□ 0.39
EBI3-202ENST00000599339 GNAT2P19087 354 aa17.48■□□□□ 0.39
EBI3-202ENST00000599339 STAT3P40763 770 aa17.48■□□□□ 0.39
EBI3-202ENST00000599339 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
EBI3-202ENST00000599339 FAM83BQ5T0W9 1011 aa17.48■□□□□ 0.39
EBI3-202ENST00000599339 GJC2Q5T442 439 aaPredicted RBP17.48■□□□□ 0.39
EBI3-202ENST00000599339 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
EBI3-202ENST00000599339 VWA5AO00534 786 aa17.47■□□□□ 0.39
EBI3-202ENST00000599339 MYCNP04198 464 aaPredicted RBP17.47■□□□□ 0.39
EBI3-202ENST00000599339 DEFB123Q8N688 67 aa17.47■□□□□ 0.39
EBI3-202ENST00000599339 FBXO28Q9NVF7 368 aa17.47■□□□□ 0.39
EBI3-202ENST00000599339 NYAP2Q9P242 653 aa17.47■□□□□ 0.39
EBI3-202ENST00000599339 DIS3Q9Y2L1 958 aaKnown RBP17.47■□□□□ 0.39
EBI3-202ENST00000599339 ROBO3Q96MS0 1386 aa17.47■□□□□ 0.39
EBI3-202ENST00000599339 APPP05067 770 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 RASA1P20936 1047 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 TDO2P48775 406 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 RTP1P59025 263 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 ANO1Q5XXA6 986 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 OSBP2Q969R2 916 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 SLF1Q9BQI6 1058 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 ZNF214Q9UL59 606 aaPredicted RBP17.46■□□□□ 0.39
EBI3-202ENST00000599339 ATP11BQ9Y2G3 1177 aa17.46■□□□□ 0.39
EBI3-202ENST00000599339 COL11A1P12107 1806 aaPredicted RBP17.46■□□□□ 0.39
EBI3-202ENST00000599339 ERC2O15083 957 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 GPAA1O43292 621 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 RARBP10826 455 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
EBI3-202ENST00000599339 STK11IPQ8N1F8 1099 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 SLC17A8Q8NDX2 589 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 TINF2Q9BSI4 451 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
EBI3-202ENST00000599339 TEX13BQ9BXU2 312 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 CTDP1Q9Y5B0 961 aaPredicted RBP17.45■□□□□ 0.38
EBI3-202ENST00000599339 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
EBI3-202ENST00000599339 ZNFX1Q9P2E3 1918 aaKnown RBP17.45■□□□□ 0.38
EBI3-202ENST00000599339 TTC41PQ6P2S7 1318 aa17.45■□□□□ 0.38
EBI3-202ENST00000599339 F5H6K3 240 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 PGK2P07205 417 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 KLRC3Q07444 240 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 LRRC41Q15345 812 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 FAM47AQ5JRC9 791 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 TSHZ3Q63HK5 1081 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 SLC39A5Q6ZMH5 540 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 NACAP1Q9BZK3 213 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 SYNPO2Q9UMS6 1093 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
EBI3-202ENST00000599339 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
EBI3-202ENST00000599339 ADCYAP1R1P41586 468 aa17.43■□□□□ 0.38
EBI3-202ENST00000599339 ZNF792Q3KQV3 632 aa17.43■□□□□ 0.38
EBI3-202ENST00000599339 SNRNP48Q6IEG0 339 aaKnown RBP17.43■□□□□ 0.38
EBI3-202ENST00000599339 RNF180Q86T96 592 aa17.43■□□□□ 0.38
EBI3-202ENST00000599339 PRPF38AQ8NAV1 312 aaKnown RBP17.43■□□□□ 0.38
EBI3-202ENST00000599339 REPS2Q8NFH8 660 aa17.43■□□□□ 0.38
EBI3-202ENST00000599339 XPNPEP3Q9NQH7 507 aa17.43■□□□□ 0.38
EBI3-202ENST00000599339 CLIP2Q9UDT6 1046 aa17.43■□□□□ 0.38
EBI3-202ENST00000599339 PATL2C9JE40 543 aaKnown RBP17.42■□□□□ 0.38
EBI3-202ENST00000599339 ZBED4O75132 1171 aa17.42■□□□□ 0.38
EBI3-202ENST00000599339 NDUFB10O96000 172 aa17.42■□□□□ 0.38
EBI3-202ENST00000599339 AKR1A1P14550 325 aa17.42■□□□□ 0.38
EBI3-202ENST00000599339 MSL3Q8N5Y2 521 aaKnown RBP17.42■□□□□ 0.38
EBI3-202ENST00000599339 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
EBI3-202ENST00000599339 NUP88Q99567 741 aaPredicted RBP17.42■□□□□ 0.38
EBI3-202ENST00000599339 PRDM5Q9NQX1 630 aaPredicted RBP17.42■□□□□ 0.38
EBI3-202ENST00000599339 PLXNA1Q9UIW2 1896 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 DNAH12Q6ZR08 3092 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 M0R2C6 588 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 TTLL1O95922 423 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 PDE4BQ07343 736 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 SNX17Q15036 470 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 TRIM60Q495X7 471 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 C1orf53Q5VUE5 145 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 Q7L0L9 218 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 IFNL3Q8IZI9 196 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 FERMT2Q96AC1 680 aa17.41■□□□□ 0.38
EBI3-202ENST00000599339 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms