RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.85□□□□□ -0.83
LINC00343-208ENST00000599264 RBAK-RBAKDNI3L0D1 243 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 ZNF76P36508 570 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 CCNFP41002 786 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 CRKP46108 304 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 MESP2Q0VG99 397 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 CDCP2Q5VXM1 449 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 GK5Q6ZS86 529 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 KIAA0825Q8IV33 1275 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 SPON2Q9BUD6 331 aa9.85□□□□□ -0.83
LINC00343-208ENST00000599264 DBX1A6NMT0 343 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 DUSP4Q13115 394 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 ZNF124Q15973 351 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 OVOS1Q6IE37 1185 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 SPPL2CQ8IUH8 684 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 LILRA2Q8N149 483 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 VWCEQ96DN2 955 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 CNNM2Q9H8M5 875 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 SNAPC4Q5SXM2 1469 aa9.84□□□□□ -0.83
LINC00343-208ENST00000599264 FITM1A5D6W6 292 aa9.83□□□□□ -0.84
LINC00343-208ENST00000599264 UBOX5O94941 541 aa9.83□□□□□ -0.84
LINC00343-208ENST00000599264 MFAP1P55081 439 aaKnown RBP9.83□□□□□ -0.84
LINC00343-208ENST00000599264 JAG1P78504 1218 aa9.83□□□□□ -0.84
LINC00343-208ENST00000599264 NMIQ13287 307 aaPredicted RBP9.83□□□□□ -0.84
LINC00343-208ENST00000599264 PRR23BQ6ZRT6 265 aa9.83□□□□□ -0.84
LINC00343-208ENST00000599264 NLRC3Q7RTR2 1065 aa9.83□□□□□ -0.84
LINC00343-208ENST00000599264 METTL5Q9NRN9 209 aaKnown RBP9.83□□□□□ -0.84
LINC00343-208ENST00000599264 CLEC3AO75596 197 aa9.82□□□□□ -0.84
LINC00343-208ENST00000599264 ZGLP1P0C6A0 271 aa9.82□□□□□ -0.84
LINC00343-208ENST00000599264 CHRNEQ04844 493 aa9.82□□□□□ -0.84
LINC00343-208ENST00000599264 CLCQ05315 142 aa9.82□□□□□ -0.84
LINC00343-208ENST00000599264 SLITRK4Q8IW52 837 aa9.82□□□□□ -0.84
LINC00343-208ENST00000599264 FBXO15Q8NCQ5 510 aaPredicted RBP9.82□□□□□ -0.84
LINC00343-208ENST00000599264 SYTL5Q8TDW5 730 aaPredicted RBP9.82□□□□□ -0.84
LINC00343-208ENST00000599264 ATG4CQ96DT6 458 aa9.82□□□□□ -0.84
LINC00343-208ENST00000599264 NSUN3Q9H649 340 aaKnown RBP9.82□□□□□ -0.84
LINC00343-208ENST00000599264 POLA1P09884 1462 aaPredicted RBP9.82□□□□□ -0.84
LINC00343-208ENST00000599264 SSU72P8A0A1W2PR75 194 aa9.81□□□□□ -0.84
LINC00343-208ENST00000599264 SHISA3A0PJX4 238 aa9.81□□□□□ -0.84
LINC00343-208ENST00000599264 ERVFC1P60507 584 aa9.81□□□□□ -0.84
LINC00343-208ENST00000599264 NBPF12Q5TAG4 269 aaPredicted RBP9.81□□□□□ -0.84
LINC00343-208ENST00000599264 DAGLBQ8NCG7 672 aa9.81□□□□□ -0.84
LINC00343-208ENST00000599264 DIRC2Q96SL1 478 aa9.81□□□□□ -0.84
LINC00343-208ENST00000599264 BACH2Q9BYV9 841 aa9.81□□□□□ -0.84
LINC00343-208ENST00000599264 RNF111Q6ZNA4 994 aa9.8□□□□□ -0.84
LINC00343-208ENST00000599264 USP48Q86UV5 1035 aa9.8□□□□□ -0.84
LINC00343-208ENST00000599264 EPB41L4BQ9H329 900 aa9.8□□□□□ -0.84
LINC00343-208ENST00000599264 DCP1AQ9NPI6 582 aaPredicted RBP9.8□□□□□ -0.84
LINC00343-208ENST00000599264 WDR97A6NE52 1622 aa9.79□□□□□ -0.84
LINC00343-208ENST00000599264 IMPDH2P12268 514 aa9.79□□□□□ -0.84
LINC00343-208ENST00000599264 RAP1GAPP47736 663 aa9.79□□□□□ -0.84
LINC00343-208ENST00000599264 TEKQ02763 1124 aa9.79□□□□□ -0.84
LINC00343-208ENST00000599264 NR0B2Q15466 257 aa9.79□□□□□ -0.84
LINC00343-208ENST00000599264 NBPF9Q3BBW0 867 aa9.79□□□□□ -0.84
LINC00343-208ENST00000599264 SYDE1Q6ZW31 735 aaPredicted RBP9.79□□□□□ -0.84
LINC00343-208ENST00000599264 ZNF655Q8N720 491 aaPredicted RBP9.79□□□□□ -0.84
LINC00343-208ENST00000599264 ANKS4BQ8N8V4 417 aa9.79□□□□□ -0.84
LINC00343-208ENST00000599264 EAF1Q96JC9 268 aaPredicted RBP9.79□□□□□ -0.84
LINC00343-208ENST00000599264 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
LINC00343-208ENST00000599264 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
LINC00343-208ENST00000599264 MEIS3P2A8K0S8 358 aa9.78□□□□□ -0.84
LINC00343-208ENST00000599264 NME1P15531 152 aaKnown RBP9.78□□□□□ -0.84
LINC00343-208ENST00000599264 POLR2BP30876 1174 aaKnown RBP9.78□□□□□ -0.84
LINC00343-208ENST00000599264 HDAC8Q9BY41 377 aa9.78□□□□□ -0.84
LINC00343-208ENST00000599264 CWC22Q9HCG8 908 aaKnown RBP9.78□□□□□ -0.84
LINC00343-208ENST00000599264 RAD54L2Q9Y4B4 1467 aa9.78□□□□□ -0.84
LINC00343-208ENST00000599264 NFIBO00712 420 aa9.77□□□□□ -0.85
LINC00343-208ENST00000599264 TSPAN15O95858 294 aa9.77□□□□□ -0.85
LINC00343-208ENST00000599264 PCBP3P57721 371 aaKnown RBP9.77□□□□□ -0.85
LINC00343-208ENST00000599264 SNX17Q15036 470 aa9.77□□□□□ -0.85
LINC00343-208ENST00000599264 LDLRAD1Q5T700 205 aa9.77□□□□□ -0.85
LINC00343-208ENST00000599264 HOMEZQ8IX15 550 aa9.77□□□□□ -0.85
LINC00343-208ENST00000599264 RNF34Q969K3 372 aa9.77□□□□□ -0.85
LINC00343-208ENST00000599264 SLC6A17Q9H1V8 727 aa9.77□□□□□ -0.85
LINC00343-208ENST00000599264 ERCC6L2Q5T890 1561 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 TNFRSF10CO14798 259 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 RPL10P27635 214 aaKnown RBP9.76□□□□□ -0.85
LINC00343-208ENST00000599264 TRHRP34981 398 aaPredicted RBP9.76□□□□□ -0.85
LINC00343-208ENST00000599264 FANCCQ00597 558 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 TCTN2Q96GX1 697 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 DHRS1Q96LJ7 313 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 TOX2Q96NM4 488 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 KRTAP9-9Q9BYP9 154 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 KRTAP9-4Q9BYQ2 154 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 MKRN2Q9H000 416 aaKnown RBP9.76□□□□□ -0.85
LINC00343-208ENST00000599264 RNF32Q9H0A6 362 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 C19orf44Q9H6X5 657 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 ZMYM5Q9UJ78 669 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 SYNJ2O15056 1496 aa9.76□□□□□ -0.85
LINC00343-208ENST00000599264 TMEM253P0C7T8 217 aa9.75□□□□□ -0.85
LINC00343-208ENST00000599264 TMC3Q7Z5M5 1100 aa9.75□□□□□ -0.85
LINC00343-208ENST00000599264 ANKLE2Q86XL3 938 aa9.75□□□□□ -0.85
LINC00343-208ENST00000599264 USHBP1Q8N6Y0 703 aa9.75□□□□□ -0.85
LINC00343-208ENST00000599264 FERD3LQ96RJ6 166 aa9.75□□□□□ -0.85
LINC00343-208ENST00000599264 CCDC88BA6NC98 1476 aa9.74□□□□□ -0.85
LINC00343-208ENST00000599264 INTS3Q68E01 1043 aaKnown RBP9.74□□□□□ -0.85
LINC00343-208ENST00000599264 WAPLQ7Z5K2 1190 aa9.74□□□□□ -0.85
LINC00343-208ENST00000599264 LINC00116Q8NCU8 138 aa9.74□□□□□ -0.85
LINC00343-208ENST00000599264 SLC6A18Q96N87 628 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms