RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 FCER1AP12319 257 aa27.19■■□□□ 1.94
SSBP4-203ENST00000593641 CTR9Q6PD62 1173 aa27.19■■□□□ 1.94
SSBP4-203ENST00000593641 LBHD1Q9BQE6 289 aaPredicted RBP27.19■■□□□ 1.94
SSBP4-203ENST00000593641 PRKAG2Q9UGJ0 569 aa27.19■■□□□ 1.94
SSBP4-203ENST00000593641 SMCHD1A6NHR9 2005 aa27.18■■□□□ 1.94
SSBP4-203ENST00000593641 SEPT4O43236 478 aa27.18■■□□□ 1.94
SSBP4-203ENST00000593641 RAD21O60216 631 aa27.18■■□□□ 1.94
SSBP4-203ENST00000593641 TMEM132BQ14DG7 1078 aa27.18■■□□□ 1.94
SSBP4-203ENST00000593641 GJC2Q5T442 439 aaPredicted RBP27.18■■□□□ 1.94
SSBP4-203ENST00000593641 DEFB123Q8N688 67 aa27.18■■□□□ 1.94
SSBP4-203ENST00000593641 ECHDC1Q9NTX5 307 aa27.18■■□□□ 1.94
SSBP4-203ENST00000593641 SLC17A8Q8NDX2 589 aa27.17■■□□□ 1.94
SSBP4-203ENST00000593641 GPATCH3Q96I76 525 aa27.17■■□□□ 1.94
SSBP4-203ENST00000593641 MAML3Q96JK9 1138 aa27.17■■□□□ 1.94
SSBP4-203ENST00000593641 GREB1LQ9C091 1923 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-203ENST00000593641 MYCNP04198 464 aaPredicted RBP27.16■■□□□ 1.94
SSBP4-203ENST00000593641 RTP1P59025 263 aa27.16■■□□□ 1.94
SSBP4-203ENST00000593641 C20orf194Q5TEA3 1177 aa27.16■■□□□ 1.94
SSBP4-203ENST00000593641 ANO1Q5XXA6 986 aa27.16■■□□□ 1.94
SSBP4-203ENST00000593641 MMP19Q99542 508 aa27.16■■□□□ 1.94
SSBP4-203ENST00000593641 FBXO28Q9NVF7 368 aa27.16■■□□□ 1.94
SSBP4-203ENST00000593641 PPP1R9AQ9ULJ8 1098 aa27.15■■□□□ 1.94
SSBP4-203ENST00000593641 ADAMTS5Q9UNA0 930 aa27.15■■□□□ 1.94
SSBP4-203ENST00000593641 MYH4Q9Y623 1939 aa27.14■■□□□ 1.94
SSBP4-203ENST00000593641 STRBPQ96SI9 672 aaKnown RBP27.14■■□□□ 1.94
SSBP4-203ENST00000593641 ATP11BQ9Y2G3 1177 aa27.14■■□□□ 1.94
SSBP4-203ENST00000593641 LTBP2Q14767 1821 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 VWA5AO00534 786 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 COPB2P35606 906 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 KCTD2Q14681 263 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 PRAMEF19Q5SWL8 479 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 FAM83BQ5T0W9 1011 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 Q7L0L9 218 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 RIOX2Q8IUF8 465 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 KBTBD3Q8NAB2 608 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 MKNK2Q9HBH9 465 aa27.13■■□□□ 1.93
SSBP4-203ENST00000593641 STAT3P40763 770 aa27.12■■□□□ 1.93
SSBP4-203ENST00000593641 SBK1Q52WX2 424 aa27.12■■□□□ 1.93
SSBP4-203ENST00000593641 GIMAP6Q6P9H5 292 aa27.12■■□□□ 1.93
SSBP4-203ENST00000593641 APPBP2Q92624 585 aa27.12■■□□□ 1.93
SSBP4-203ENST00000593641 NRBP1Q9UHY1 535 aa27.12■■□□□ 1.93
SSBP4-203ENST00000593641 MINDY4BA8MYZ0 360 aa27.11■■□□□ 1.93
SSBP4-203ENST00000593641 SLC39A5Q6ZMH5 540 aa27.11■■□□□ 1.93
SSBP4-203ENST00000593641 STK11IPQ8N1F8 1099 aa27.11■■□□□ 1.93
SSBP4-203ENST00000593641 LAMA2P24043 3122 aaKnown RBP27.11■■□□□ 1.93
SSBP4-203ENST00000593641 PGK2P07205 417 aa27.1■■□□□ 1.93
SSBP4-203ENST00000593641 LRRC41Q15345 812 aa27.1■■□□□ 1.93
SSBP4-203ENST00000593641 FAM47AQ5JRC9 791 aa27.1■■□□□ 1.93
SSBP4-203ENST00000593641 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.1■■□□□ 1.93
SSBP4-203ENST00000593641 ZNF214Q9UL59 606 aaPredicted RBP27.1■■□□□ 1.93
SSBP4-203ENST00000593641 DIS3Q9Y2L1 958 aaKnown RBP27.1■■□□□ 1.93
SSBP4-203ENST00000593641 ROBO3Q96MS0 1386 aa27.09■■□□□ 1.93
SSBP4-203ENST00000593641 GSG1L2A8MUP6 293 aa27.09■■□□□ 1.93
SSBP4-203ENST00000593641 ZFYP08048 801 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-203ENST00000593641 RARBP10826 455 aa27.09■■□□□ 1.93
SSBP4-203ENST00000593641 RASA1P20936 1047 aa27.09■■□□□ 1.93
SSBP4-203ENST00000593641 SLF1Q9BQI6 1058 aa27.09■■□□□ 1.93
SSBP4-203ENST00000593641 TINF2Q9BSI4 451 aa27.09■■□□□ 1.93
SSBP4-203ENST00000593641 PRDM5Q9NQX1 630 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-203ENST00000593641 RNF113AO15541 343 aaKnown RBP27.08■■□□□ 1.93
SSBP4-203ENST00000593641 GNAT2P19087 354 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 ADCYAP1R1P41586 468 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 TDO2P48775 406 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 OSBP2Q969R2 916 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 DCTPP1Q9H773 170 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 ZNF287Q9HBT7 754 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 XPNPEP3Q9NQH7 507 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 MTMR10Q9NXD2 777 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 NYAP2Q9P242 653 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 STXBP5LQ9Y2K9 1186 aa27.08■■□□□ 1.93
SSBP4-203ENST00000593641 GPAA1O43292 621 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 SNX17Q15036 470 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 LRRFIP1Q32MZ4 808 aaKnown RBP27.07■■□□□ 1.92
SSBP4-203ENST00000593641 TRIM60Q495X7 471 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 TSHZ3Q63HK5 1081 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 REPS2Q8NFH8 660 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 FERMT2Q96AC1 680 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 NUP88Q99567 741 aaPredicted RBP27.07■■□□□ 1.92
SSBP4-203ENST00000593641 TEX13BQ9BXU2 312 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 A0A0C4DFX4 3053 aa27.07■■□□□ 1.92
SSBP4-203ENST00000593641 NDUFB10O96000 172 aa27.06■■□□□ 1.92
SSBP4-203ENST00000593641 APPP05067 770 aa27.06■■□□□ 1.92
SSBP4-203ENST00000593641 ZNF792Q3KQV3 632 aa27.06■■□□□ 1.92
SSBP4-203ENST00000593641 RNF180Q86T96 592 aa27.06■■□□□ 1.92
SSBP4-203ENST00000593641 F5H6K3 240 aa27.05■■□□□ 1.92
SSBP4-203ENST00000593641 KLRC3Q07444 240 aa27.05■■□□□ 1.92
SSBP4-203ENST00000593641 SNRNP48Q6IEG0 339 aaKnown RBP27.05■■□□□ 1.92
SSBP4-203ENST00000593641 ZNF444Q8N0Y2 327 aaPredicted RBP27.05■■□□□ 1.92
SSBP4-203ENST00000593641 CNPY2Q9Y2B0 182 aa27.05■■□□□ 1.92
SSBP4-203ENST00000593641 CTDP1Q9Y5B0 961 aaPredicted RBP27.05■■□□□ 1.92
SSBP4-203ENST00000593641 AKR1A1P14550 325 aa27.04■■□□□ 1.92
SSBP4-203ENST00000593641 C1orf53Q5VUE5 145 aa27.04■■□□□ 1.92
SSBP4-203ENST00000593641 PRPF38AQ8NAV1 312 aaKnown RBP27.04■■□□□ 1.92
SSBP4-203ENST00000593641 EPB41L4AQ9HCS5 686 aaPredicted RBP27.04■■□□□ 1.92
SSBP4-203ENST00000593641 CLIP2Q9UDT6 1046 aa27.04■■□□□ 1.92
SSBP4-203ENST00000593641 CUL9Q8IWT3 2517 aa27.03■■□□□ 1.92
SSBP4-203ENST00000593641 MSL3Q8N5Y2 521 aaKnown RBP27.03■■□□□ 1.92
SSBP4-203ENST00000593641 DDX11Q96FC9 970 aa27.03■■□□□ 1.92
SSBP4-203ENST00000593641 PDLIM7Q9NR12 457 aa27.03■■□□□ 1.92
SSBP4-203ENST00000593641 PHF24Q9UPV7 400 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms