RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ABRAQ8N0Z2 381 aa19.68■□□□□ 0.74
LIG1-205ENST00000593425 ARRDC4Q8NCT1 418 aa19.68■□□□□ 0.74
LIG1-205ENST00000593425 ATP11BQ9Y2G3 1177 aa19.68■□□□□ 0.74
LIG1-205ENST00000593425 DLL1O00548 723 aa19.67■□□□□ 0.74
LIG1-205ENST00000593425 SMARCA5O60264 1052 aaPredicted RBP19.67■□□□□ 0.74
LIG1-205ENST00000593425 FAM47AQ5JRC9 791 aa19.67■□□□□ 0.74
LIG1-205ENST00000593425 LBHD1Q9BQE6 289 aaPredicted RBP19.67■□□□□ 0.74
LIG1-205ENST00000593425 SLC5A4Q9NY91 659 aa19.67■□□□□ 0.74
LIG1-205ENST00000593425 ADAMTS5Q9UNA0 930 aa19.67■□□□□ 0.74
LIG1-205ENST00000593425 STXBP5LQ9Y2K9 1186 aa19.67■□□□□ 0.74
LIG1-205ENST00000593425 KBTBD13C9JR72 458 aa19.66■□□□□ 0.74
LIG1-205ENST00000593425 MYCNP04198 464 aaPredicted RBP19.66■□□□□ 0.74
LIG1-205ENST00000593425 FCER1AP12319 257 aa19.66■□□□□ 0.74
LIG1-205ENST00000593425 C20orf194Q5TEA3 1177 aa19.66■□□□□ 0.74
LIG1-205ENST00000593425 SLC39A5Q6ZMH5 540 aa19.66■□□□□ 0.74
LIG1-205ENST00000593425 DDRGK1Q96HY6 314 aa19.66■□□□□ 0.74
LIG1-205ENST00000593425 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.66■□□□□ 0.74
LIG1-205ENST00000593425 LRRCC1Q9C099 1032 aa19.66■□□□□ 0.74
LIG1-205ENST00000593425 KANSL2Q9H9L4 492 aa19.66■□□□□ 0.74
LIG1-205ENST00000593425 SLC25A27O95847 323 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 PGK2P07205 417 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 SNX17Q15036 470 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 LRRC41Q15345 812 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 TRIM60Q495X7 471 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 RIOX2Q8IUF8 465 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 MMP19Q99542 508 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 CHMP4BQ9H444 224 aaKnown RBP19.65■□□□□ 0.74
LIG1-205ENST00000593425 ARPP21Q9UBL0 812 aaPredicted RBP19.65■□□□□ 0.74
LIG1-205ENST00000593425 PRKAG2Q9UGJ0 569 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 DNAH12Q6ZR08 3092 aa19.65■□□□□ 0.74
LIG1-205ENST00000593425 SMCHD1A6NHR9 2005 aa19.64■□□□□ 0.74
LIG1-205ENST00000593425 RAD21O60216 631 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 FAM83BQ5T0W9 1011 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 ZSCAN25Q6NSZ9 544 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 REPS2Q8NFH8 660 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 FERMT2Q96AC1 680 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 GOPCQ9HD26 462 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 ZNF214Q9UL59 606 aaPredicted RBP19.64■□□□□ 0.73
LIG1-205ENST00000593425 PPP1R9AQ9ULJ8 1098 aa19.64■□□□□ 0.73
LIG1-205ENST00000593425 VWA5AO00534 786 aa19.63■□□□□ 0.73
LIG1-205ENST00000593425 ADCYAP1R1P41586 468 aa19.63■□□□□ 0.73
LIG1-205ENST00000593425 STK11IPQ8N1F8 1099 aa19.63■□□□□ 0.73
LIG1-205ENST00000593425 STRBPQ96SI9 672 aaKnown RBP19.63■□□□□ 0.73
LIG1-205ENST00000593425 PRDM5Q9NQX1 630 aaPredicted RBP19.63■□□□□ 0.73
LIG1-205ENST00000593425 MYH4Q9Y623 1939 aa19.63■□□□□ 0.73
LIG1-205ENST00000593425 ROBO3Q96MS0 1386 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 POTEB2H3BUK9 544 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 TAL1P17542 331 aaPredicted RBP19.62■□□□□ 0.73
LIG1-205ENST00000593425 RASA1P20936 1047 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 STAT3P40763 770 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 ZNF792Q3KQV3 632 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 NUP88Q99567 741 aaPredicted RBP19.62■□□□□ 0.73
LIG1-205ENST00000593425 TINF2Q9BSI4 451 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 PDLIM7Q9NR12 457 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 ECHDC1Q9NTX5 307 aa19.62■□□□□ 0.73
LIG1-205ENST00000593425 GSG1L2A8MUP6 293 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 KCTD2Q14681 263 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 SBK1Q52WX2 424 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 C9orf50Q5SZB4 431 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 TSHZ3Q63HK5 1081 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 SH3RF1Q7Z6J0 888 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 GUCD1Q96NT3 240 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 XPNPEP3Q9NQH7 507 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 NRBP1Q9UHY1 535 aa19.61■□□□□ 0.73
LIG1-205ENST00000593425 PGK1P00558 417 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 RARBP10826 455 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 SHHQ15465 462 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 FAM109BQ6ICB4 259 aaPredicted RBP19.6■□□□□ 0.73
LIG1-205ENST00000593425 KBTBD3Q8NAB2 608 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 BADQ92934 168 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 OSBP2Q969R2 916 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 LENG1Q96BZ8 264 aaPredicted RBP19.6■□□□□ 0.73
LIG1-205ENST00000593425 FAM161BQ96MY7 647 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 EPB41L4AQ9HCS5 686 aaPredicted RBP19.6■□□□□ 0.73
LIG1-205ENST00000593425 PHF24Q9UPV7 400 aa19.6■□□□□ 0.73
LIG1-205ENST00000593425 DIS3Q9Y2L1 958 aaKnown RBP19.6■□□□□ 0.73
LIG1-205ENST00000593425 TRIM43BA6NCK2 446 aa19.59■□□□□ 0.73
LIG1-205ENST00000593425 MINDY4BA8MYZ0 360 aa19.59■□□□□ 0.73
LIG1-205ENST00000593425 ZNF865P0CJ78 1059 aaPredicted RBP19.59■□□□□ 0.73
LIG1-205ENST00000593425 C1orf53Q5VUE5 145 aa19.59■□□□□ 0.73
LIG1-205ENST00000593425 APPBP2Q92624 585 aa19.59■□□□□ 0.73
LIG1-205ENST00000593425 TRIM43Q96BQ3 446 aaPredicted RBP19.59■□□□□ 0.73
LIG1-205ENST00000593425 SLF1Q9BQI6 1058 aa19.59■□□□□ 0.73
LIG1-205ENST00000593425 NYAP2Q9P242 653 aa19.59■□□□□ 0.73
LIG1-205ENST00000593425 NDUFB10O96000 172 aa19.58■□□□□ 0.72
LIG1-205ENST00000593425 COPB2P35606 906 aa19.58■□□□□ 0.72
LIG1-205ENST00000593425 SNRNP48Q6IEG0 339 aaKnown RBP19.58■□□□□ 0.72
LIG1-205ENST00000593425 MKNK2Q9HBH9 465 aa19.58■□□□□ 0.72
LIG1-205ENST00000593425 RIPK3Q9Y572 518 aa19.58■□□□□ 0.72
LIG1-205ENST00000593425 IGKV6D-41A0A0C4DH26 115 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 F5H6K3 240 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 M0R2C6 588 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 GPAA1O43292 621 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 AKR1A1P14550 325 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 TLE2Q04725 743 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 KLRC3Q07444 240 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 GIMAP6Q6P9H5 292 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 TEX13BQ9BXU2 312 aa19.57■□□□□ 0.72
LIG1-205ENST00000593425 A0A1W2PQ45 241 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms