RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MKNK2Q9HBH9 465 aa22.57■■□□□ 1.2
CCDC43-205ENST00000592333 PPP1R9AQ9ULJ8 1098 aa22.57■■□□□ 1.2
CCDC43-205ENST00000592333 DIS3Q9Y2L1 958 aaKnown RBP22.57■■□□□ 1.2
CCDC43-205ENST00000592333 SZT2Q5T011 3432 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 SMIM22K7EJ46 135 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 RASA1P20936 1047 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 CNGA1P29973 690 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 PLS1Q14651 629 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 TMEM132BQ14DG7 1078 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 NCAPG2Q86XI2 1143 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.56■■□□□ 1.2
CCDC43-205ENST00000592333 PARP14Q460N5 1801 aa22.56■■□□□ 1.2
CCDC43-205ENST00000592333 GREB1LQ9C091 1923 aaPredicted RBP22.55■■□□□ 1.2
CCDC43-205ENST00000592333 FRMPD3Q5JV73 1810 aa22.55■■□□□ 1.2
CCDC43-205ENST00000592333 PATL2C9JE40 543 aaKnown RBP22.55■■□□□ 1.2
CCDC43-205ENST00000592333 VWA5AO00534 786 aa22.55■■□□□ 1.2
CCDC43-205ENST00000592333 SEPT4O43236 478 aa22.55■■□□□ 1.2
CCDC43-205ENST00000592333 GPAA1O43292 621 aa22.55■■□□□ 1.2
CCDC43-205ENST00000592333 COBLO75128 1261 aa22.55■■□□□ 1.2
CCDC43-205ENST00000592333 STAT3P40763 770 aa22.54■■□□□ 1.2
CCDC43-205ENST00000592333 TRPV1Q8NER1 839 aa22.54■■□□□ 1.2
CCDC43-205ENST00000592333 MKL1Q969V6 931 aa22.54■■□□□ 1.2
CCDC43-205ENST00000592333 MAML3Q96JK9 1138 aa22.54■■□□□ 1.2
CCDC43-205ENST00000592333 NACAP1Q9BZK3 213 aa22.54■■□□□ 1.2
CCDC43-205ENST00000592333 ZMYND8Q9ULU4 1186 aaPredicted RBP22.54■■□□□ 1.2
CCDC43-205ENST00000592333 LRRC26Q2I0M4 334 aa22.53■■□□□ 1.2
CCDC43-205ENST00000592333 LRIT3Q3SXY7 679 aa22.53■■□□□ 1.2
CCDC43-205ENST00000592333 ZNF444Q8N0Y2 327 aaPredicted RBP22.53■■□□□ 1.2
CCDC43-205ENST00000592333 SENP6Q9GZR1 1112 aaPredicted RBP22.53■■□□□ 1.2
CCDC43-205ENST00000592333 MINDY4BA8MYZ0 360 aa22.52■■□□□ 1.2
CCDC43-205ENST00000592333 ATP2A1O14983 1001 aa22.52■■□□□ 1.2
CCDC43-205ENST00000592333 MAGEA10P43363 369 aaPredicted RBP22.52■■□□□ 1.2
CCDC43-205ENST00000592333 TDO2P48775 406 aa22.52■■□□□ 1.2
CCDC43-205ENST00000592333 KCTD2Q14681 263 aa22.52■■□□□ 1.2
CCDC43-205ENST00000592333 TDHQ8IZJ6 230 aa22.52■■□□□ 1.2
CCDC43-205ENST00000592333 MSL3Q8N5Y2 521 aaKnown RBP22.52■■□□□ 1.2
CCDC43-205ENST00000592333 PRPF38AQ8NAV1 312 aaKnown RBP22.52■■□□□ 1.2
CCDC43-205ENST00000592333 ZNF214Q9UL59 606 aaPredicted RBP22.52■■□□□ 1.2
CCDC43-205ENST00000592333 IGKV6D-41A0A0C4DH26 115 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 F5H6K3 240 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 SYN1P17600 705 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 KLRC3Q07444 240 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 FAM83BQ5T0W9 1011 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 TICAM2Q86XR7 235 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 IFNL3Q8IZI9 196 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 REPS2Q8NFH8 660 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 PI4K2BQ8TCG2 481 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 MMP19Q99542 508 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 SLF1Q9BQI6 1058 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 PCDHB15Q9Y5E8 787 aa22.51■■□□□ 1.19
CCDC43-205ENST00000592333 LAMA3Q16787 3333 aa22.5■■□□□ 1.19
CCDC43-205ENST00000592333 APPP05067 770 aa22.5■■□□□ 1.19
CCDC43-205ENST00000592333 SLC3A2P08195 630 aaKnown RBP22.5■■□□□ 1.19
CCDC43-205ENST00000592333 PDE4BQ07343 736 aa22.5■■□□□ 1.19
CCDC43-205ENST00000592333 PPP4R3BQ5MIZ7 849 aa22.5■■□□□ 1.19
CCDC43-205ENST00000592333 TEX13BQ9BXU2 312 aa22.5■■□□□ 1.19
CCDC43-205ENST00000592333 EPB41L4AQ9HCS5 686 aaPredicted RBP22.5■■□□□ 1.19
CCDC43-205ENST00000592333 FBXO28Q9NVF7 368 aa22.5■■□□□ 1.19
CCDC43-205ENST00000592333 PLIN4Q96Q06 1357 aa22.5■■□□□ 1.19
CCDC43-205ENST00000592333 KBTBD13C9JR72 458 aa22.49■■□□□ 1.19
CCDC43-205ENST00000592333 FDX1P10109 184 aa22.49■■□□□ 1.19
CCDC43-205ENST00000592333 ZNF792Q3KQV3 632 aa22.49■■□□□ 1.19
CCDC43-205ENST00000592333 C1orf53Q5VUE5 145 aa22.49■■□□□ 1.19
CCDC43-205ENST00000592333 TSHZ3Q63HK5 1081 aa22.49■■□□□ 1.19
CCDC43-205ENST00000592333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.49■■□□□ 1.19
CCDC43-205ENST00000592333 UBE2OQ9C0C9 1292 aaKnown RBP22.49■■□□□ 1.19
CCDC43-205ENST00000592333 MTMR4Q9NYA4 1195 aa22.49■■□□□ 1.19
CCDC43-205ENST00000592333 M0R2C6 588 aa22.48■■□□□ 1.19
CCDC43-205ENST00000592333 TTLL1O95922 423 aa22.48■■□□□ 1.19
CCDC43-205ENST00000592333 NDUFB10O96000 172 aa22.48■■□□□ 1.19
CCDC43-205ENST00000592333 MX1P20591 662 aa22.48■■□□□ 1.19
CCDC43-205ENST00000592333 GMCL1P1Q8NEA9 526 aa22.48■■□□□ 1.19
CCDC43-205ENST00000592333 TINF2Q9BSI4 451 aa22.48■■□□□ 1.19
CCDC43-205ENST00000592333 CLIP2Q9UDT6 1046 aa22.48■■□□□ 1.19
CCDC43-205ENST00000592333 COL11A1P12107 1806 aaPredicted RBP22.47■■□□□ 1.19
CCDC43-205ENST00000592333 ZNFX1Q9P2E3 1918 aaKnown RBP22.47■■□□□ 1.19
CCDC43-205ENST00000592333 RAD21O60216 631 aa22.47■■□□□ 1.19
CCDC43-205ENST00000592333 OAZ1P54368 228 aa22.47■■□□□ 1.19
CCDC43-205ENST00000592333 ZMYM1Q5SVZ6 1142 aa22.47■■□□□ 1.19
CCDC43-205ENST00000592333 NEDD1Q8NHV4 660 aa22.47■■□□□ 1.19
CCDC43-205ENST00000592333 FSD1Q9BTV5 496 aa22.47■■□□□ 1.19
CCDC43-205ENST00000592333 ZBTB47Q9UFB7 747 aaPredicted RBP22.47■■□□□ 1.19
CCDC43-205ENST00000592333 FEM1BQ9UK73 627 aa22.47■■□□□ 1.19
CCDC43-205ENST00000592333 SOX1O00570 391 aaPredicted RBP22.46■■□□□ 1.19
CCDC43-205ENST00000592333 ZBED4O75132 1171 aa22.46■■□□□ 1.19
CCDC43-205ENST00000592333 AAMPQ13685 434 aa22.46■■□□□ 1.19
CCDC43-205ENST00000592333 SNX17Q15036 470 aa22.46■■□□□ 1.19
CCDC43-205ENST00000592333 SAMD1Q6SPF0 538 aaPredicted RBP22.46■■□□□ 1.19
CCDC43-205ENST00000592333 PRKAG2Q9UGJ0 569 aa22.46■■□□□ 1.19
CCDC43-205ENST00000592333 RRP1P56182 461 aaKnown RBP22.45■■□□□ 1.18
CCDC43-205ENST00000592333 GJC2Q5T442 439 aaPredicted RBP22.45■■□□□ 1.18
CCDC43-205ENST00000592333 SLC39A5Q6ZMH5 540 aa22.45■■□□□ 1.18
CCDC43-205ENST00000592333 ZNF467Q7Z7K2 595 aaPredicted RBP22.45■■□□□ 1.18
CCDC43-205ENST00000592333 CEP95Q96GE4 821 aa22.45■■□□□ 1.18
CCDC43-205ENST00000592333 LBHD1Q9BQE6 289 aaPredicted RBP22.45■■□□□ 1.18
CCDC43-205ENST00000592333 NAPBQ9H115 298 aa22.45■■□□□ 1.18
CCDC43-205ENST00000592333 FBXO40Q9UH90 709 aa22.45■■□□□ 1.18
CCDC43-205ENST00000592333 SALL3Q9BXA9 1300 aa22.45■■□□□ 1.18
CCDC43-205ENST00000592333 TSPY3P0CV98 308 aa22.44■■□□□ 1.18
CCDC43-205ENST00000592333 TSPY8P0CW00 308 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms