RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 PPP1R9AQ9ULJ8 1098 aa23.52■■□□□ 1.36
TNFRSF11A-204ENST00000592013 ADAMTS5Q9UNA0 930 aa23.52■■□□□ 1.36
TNFRSF11A-204ENST00000592013 PCDHB15Q9Y5E8 787 aa23.52■■□□□ 1.36
TNFRSF11A-204ENST00000592013 RASA1P20936 1047 aa23.51■■□□□ 1.35
TNFRSF11A-204ENST00000592013 RIOX2Q8IUF8 465 aa23.51■■□□□ 1.35
TNFRSF11A-204ENST00000592013 CLEC10AQ8IUN9 316 aa23.51■■□□□ 1.35
TNFRSF11A-204ENST00000592013 NAPBQ9H115 298 aa23.51■■□□□ 1.35
TNFRSF11A-204ENST00000592013 DNM1LO00429 736 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 VWA5AO00534 786 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 CHGBP05060 677 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 COL6A1P12109 1028 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 BMP8BP34820 402 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 STAT3P40763 770 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 TSHZ3Q63HK5 1081 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 IFNL3Q8IZI9 196 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 PRPF38AQ8NAV1 312 aaKnown RBP23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 NPLOC4Q8TAT6 608 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 MMP19Q99542 508 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 SLF1Q9BQI6 1058 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 PRO3102Q9H379 93 aa23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 DIS3Q9Y2L1 958 aaKnown RBP23.5■■□□□ 1.35
TNFRSF11A-204ENST00000592013 CYP2C19P33261 490 aa23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 MNX1P50219 401 aaPredicted RBP23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 TMEM132BQ14DG7 1078 aa23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 KIAA1755Q5JYT7 1200 aa23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 FAM83BQ5T0W9 1011 aa23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 PI4K2BQ8TCG2 481 aa23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 TEX13BQ9BXU2 312 aa23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 FLRT1Q9NZU1 646 aa23.49■■□□□ 1.35
TNFRSF11A-204ENST00000592013 KBTBD13C9JR72 458 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 F5H6K3 240 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 SEPT4O43236 478 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 TTLL1O95922 423 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 TSPY3P0CV98 308 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 TSPY8P0CW00 308 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 FDX1P10109 184 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 KLRC3Q07444 240 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 EVI5LQ96CN4 794 aa23.48■■□□□ 1.35
TNFRSF11A-204ENST00000592013 ZBED4O75132 1171 aa23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 CYBAP13498 195 aa23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 HDAC1Q13547 482 aaPredicted RBP23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 ANKRD45Q5TZF3 282 aa23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 MKL1Q969V6 931 aa23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 CLIP2Q9UDT6 1046 aa23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 PRKAG2Q9UGJ0 569 aa23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 FEM1BQ9UK73 627 aa23.47■■□□□ 1.35
TNFRSF11A-204ENST00000592013 M0R2C6 588 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 PFASO15067 1338 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 RLFQ13129 1914 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 ZMYM1Q5SVZ6 1142 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 MSL3Q8N5Y2 521 aaKnown RBP23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 GMCL1P1Q8NEA9 526 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 MAML3Q96JK9 1138 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 STAP2Q9UGK3 403 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 FBXO40Q9UH90 709 aa23.46■■□□□ 1.35
TNFRSF11A-204ENST00000592013 NDUFB10O96000 172 aa23.45■■□□□ 1.34
TNFRSF11A-204ENST00000592013 IGHA2P01877 340 aa23.45■■□□□ 1.34
TNFRSF11A-204ENST00000592013 STK11IPQ8N1F8 1099 aa23.45■■□□□ 1.34
TNFRSF11A-204ENST00000592013 SENP6Q9GZR1 1112 aaPredicted RBP23.45■■□□□ 1.34
TNFRSF11A-204ENST00000592013 EPB41L4AQ9HCS5 686 aaPredicted RBP23.45■■□□□ 1.34
TNFRSF11A-204ENST00000592013 MTMR4Q9NYA4 1195 aa23.45■■□□□ 1.34
TNFRSF11A-204ENST00000592013 PLIN4Q96Q06 1357 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 SMIM22K7EJ46 135 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 ATP2A1O14983 1001 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 COBLO75128 1261 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 OAZ1P54368 228 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 PPARAQ07869 468 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 NEDD1Q8NHV4 660 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 GDF15Q99988 308 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 FBXO28Q9NVF7 368 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 ZNF214Q9UL59 606 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 ZMYND8Q9ULU4 1186 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 CNPY2Q9Y2B0 182 aa23.44■■□□□ 1.34
TNFRSF11A-204ENST00000592013 IGKV6D-41A0A0C4DH26 115 aa23.43■■□□□ 1.34
TNFRSF11A-204ENST00000592013 DDX11Q96FC9 970 aa23.43■■□□□ 1.34
TNFRSF11A-204ENST00000592013 CEP95Q96GE4 821 aa23.43■■□□□ 1.34
TNFRSF11A-204ENST00000592013 LBHD1Q9BQE6 289 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF11A-204ENST00000592013 GREB1LQ9C091 1923 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF11A-204ENST00000592013 TRIOBPQ9H2D6 2365 aa23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 RARBP10826 455 aa23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 SNRNP48Q6IEG0 339 aaKnown RBP23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 CHURC1Q8WUH1 139 aa23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 CRBNQ96SW2 442 aa23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 TINF2Q9BSI4 451 aa23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 RWDD1Q9H446 243 aaPredicted RBP23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 HELLSQ9NRZ9 838 aa23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 PARP14Q460N5 1801 aa23.42■■□□□ 1.34
TNFRSF11A-204ENST00000592013 TSPY2A6NKD2 308 aa23.41■■□□□ 1.34
TNFRSF11A-204ENST00000592013 PRDM1O75626 825 aa23.41■■□□□ 1.34
TNFRSF11A-204ENST00000592013 TFAP4Q01664 338 aa23.41■■□□□ 1.34
TNFRSF11A-204ENST00000592013 GPR153Q6NV75 609 aa23.41■■□□□ 1.34
TNFRSF11A-204ENST00000592013 UBE2OQ9C0C9 1292 aaKnown RBP23.41■■□□□ 1.34
TNFRSF11A-204ENST00000592013 BMP3P12645 472 aa23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 MFAP1P55081 439 aaKnown RBP23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 LRRC26Q2I0M4 334 aa23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 RNF180Q86T96 592 aa23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 FAM160B2Q86V87 743 aa23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 TRPV1Q8NER1 839 aa23.4■■□□□ 1.34
TNFRSF11A-204ENST00000592013 CHST13Q8NET6 341 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms