RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 FCER1AP12319 257 aa18.89■□□□□ 0.61
CIRBP-230ENST00000591055 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
CIRBP-230ENST00000591055 GJC2Q5T442 439 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-230ENST00000591055 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
CIRBP-230ENST00000591055 A0A0C4DFX4 3053 aa18.89■□□□□ 0.61
CIRBP-230ENST00000591055 PARP14Q460N5 1801 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 KBTBD13C9JR72 458 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 PRAMEF19Q5SWL8 479 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 ANO1Q5XXA6 986 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 DEFB123Q8N688 67 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 MAML3Q96JK9 1138 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 STRBPQ96SI9 672 aaKnown RBP18.88■□□□□ 0.61
CIRBP-230ENST00000591055 LBHD1Q9BQE6 289 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-230ENST00000591055 FBXO28Q9NVF7 368 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 ADAMTS5Q9UNA0 930 aa18.88■□□□□ 0.61
CIRBP-230ENST00000591055 LAMA2P24043 3122 aaKnown RBP18.87■□□□□ 0.61
CIRBP-230ENST00000591055 RTP1P59025 263 aa18.87■□□□□ 0.61
CIRBP-230ENST00000591055 SLC17A8Q8NDX2 589 aa18.87■□□□□ 0.61
CIRBP-230ENST00000591055 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
CIRBP-230ENST00000591055 MMP19Q99542 508 aa18.87■□□□□ 0.61
CIRBP-230ENST00000591055 PRKAG2Q9UGJ0 569 aa18.87■□□□□ 0.61
CIRBP-230ENST00000591055 PPP1R9AQ9ULJ8 1098 aa18.87■□□□□ 0.61
CIRBP-230ENST00000591055 COL11A1P12107 1806 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-230ENST00000591055 GSG1L2A8MUP6 293 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 VWA5AO00534 786 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-230ENST00000591055 STAT3P40763 770 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 SBK1Q52WX2 424 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 FAM83BQ5T0W9 1011 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 GIMAP6Q6P9H5 292 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 Q7L0L9 218 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 RIOX2Q8IUF8 465 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 KBTBD3Q8NAB2 608 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 MKNK2Q9HBH9 465 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 ATP11BQ9Y2G3 1177 aa18.86■□□□□ 0.61
CIRBP-230ENST00000591055 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
CIRBP-230ENST00000591055 RASA1P20936 1047 aa18.85■□□□□ 0.61
CIRBP-230ENST00000591055 KCTD2Q14681 263 aa18.85■□□□□ 0.61
CIRBP-230ENST00000591055 STK11IPQ8N1F8 1099 aa18.85■□□□□ 0.61
CIRBP-230ENST00000591055 APPBP2Q92624 585 aa18.85■□□□□ 0.61
CIRBP-230ENST00000591055 OSBP2Q969R2 916 aa18.85■□□□□ 0.61
CIRBP-230ENST00000591055 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.85■□□□□ 0.61
CIRBP-230ENST00000591055 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
CIRBP-230ENST00000591055 SMCHD1A6NHR9 2005 aa18.84■□□□□ 0.61
CIRBP-230ENST00000591055 RNF113AO15541 343 aaKnown RBP18.84■□□□□ 0.61
CIRBP-230ENST00000591055 PGK2P07205 417 aa18.84■□□□□ 0.61
CIRBP-230ENST00000591055 COPB2P35606 906 aa18.84■□□□□ 0.61
CIRBP-230ENST00000591055 TSHZ3Q63HK5 1081 aa18.84■□□□□ 0.61
CIRBP-230ENST00000591055 SLC39A5Q6ZMH5 540 aa18.84■□□□□ 0.61
CIRBP-230ENST00000591055 NRBP1Q9UHY1 535 aa18.84■□□□□ 0.61
CIRBP-230ENST00000591055 ZFYP08048 801 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-230ENST00000591055 LRRC41Q15345 812 aa18.83■□□□□ 0.6
CIRBP-230ENST00000591055 FAM47AQ5JRC9 791 aa18.83■□□□□ 0.6
CIRBP-230ENST00000591055 REPS2Q8NFH8 660 aa18.83■□□□□ 0.6
CIRBP-230ENST00000591055 NUP88Q99567 741 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-230ENST00000591055 SLF1Q9BQI6 1058 aa18.83■□□□□ 0.6
CIRBP-230ENST00000591055 TINF2Q9BSI4 451 aa18.83■□□□□ 0.6
CIRBP-230ENST00000591055 NYAP2Q9P242 653 aa18.83■□□□□ 0.6
CIRBP-230ENST00000591055 ZNF214Q9UL59 606 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-230ENST00000591055 DIS3Q9Y2L1 958 aaKnown RBP18.83■□□□□ 0.6
CIRBP-230ENST00000591055 GREB1LQ9C091 1923 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-230ENST00000591055 GPAA1O43292 621 aa18.82■□□□□ 0.6
CIRBP-230ENST00000591055 ADCYAP1R1P41586 468 aa18.82■□□□□ 0.6
CIRBP-230ENST00000591055 TDO2P48775 406 aa18.82■□□□□ 0.6
CIRBP-230ENST00000591055 ZNF792Q3KQV3 632 aa18.82■□□□□ 0.6
CIRBP-230ENST00000591055 PLXNA1Q9UIW2 1896 aa18.82■□□□□ 0.6
CIRBP-230ENST00000591055 CUL9Q8IWT3 2517 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 F5H6K3 240 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 RARBP10826 455 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 GNAT2P19087 354 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 KLRC3Q07444 240 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 SNX17Q15036 470 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 TRIM60Q495X7 471 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 ZNF444Q8N0Y2 327 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-230ENST00000591055 FERMT2Q96AC1 680 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 ZNF287Q9HBT7 754 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-230ENST00000591055 XPNPEP3Q9NQH7 507 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 PRDM5Q9NQX1 630 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-230ENST00000591055 MTMR10Q9NXD2 777 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
CIRBP-230ENST00000591055 M0R2C6 588 aa18.8■□□□□ 0.6
CIRBP-230ENST00000591055 NDUFB10O96000 172 aa18.8■□□□□ 0.6
CIRBP-230ENST00000591055 APPP05067 770 aa18.8■□□□□ 0.6
CIRBP-230ENST00000591055 LRRFIP1Q32MZ4 808 aaKnown RBP18.8■□□□□ 0.6
CIRBP-230ENST00000591055 SNRNP48Q6IEG0 339 aaKnown RBP18.8■□□□□ 0.6
CIRBP-230ENST00000591055 TEX13BQ9BXU2 312 aa18.8■□□□□ 0.6
CIRBP-230ENST00000591055 STXBP5LQ9Y2K9 1186 aa18.8■□□□□ 0.6
CIRBP-230ENST00000591055 IGKV6D-41A0A0C4DH26 115 aa18.79■□□□□ 0.6
CIRBP-230ENST00000591055 TAL1P17542 331 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-230ENST00000591055 RNF180Q86T96 592 aa18.79■□□□□ 0.6
CIRBP-230ENST00000591055 PRPF38AQ8NAV1 312 aaKnown RBP18.79■□□□□ 0.6
CIRBP-230ENST00000591055 PHF24Q9UPV7 400 aa18.79■□□□□ 0.6
CIRBP-230ENST00000591055 CNPY2Q9Y2B0 182 aa18.79■□□□□ 0.6
CIRBP-230ENST00000591055 CTDP1Q9Y5B0 961 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-230ENST00000591055 MYH4Q9Y623 1939 aa18.78■□□□□ 0.6
CIRBP-230ENST00000591055 PATL2C9JE40 543 aaKnown RBP18.78■□□□□ 0.6
CIRBP-230ENST00000591055 ZBED4O75132 1171 aa18.78■□□□□ 0.6
CIRBP-230ENST00000591055 PRDM1O75626 825 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms