RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CCNA1P78396 465 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 RRP12Q5JTH9 1297 aaKnown RBP26.47■■□□□ 1.83
MBD3-208ENST00000590830 AKNAD1Q5T1N1 836 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 CCAR1Q8IX12 1150 aaKnown RBP26.47■■□□□ 1.83
MBD3-208ENST00000590830 STAG1Q8WVM7 1258 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 NUDT12Q9BQG2 462 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 TMEM106CQ9BVX2 250 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 SPATC1LQ9H0A9 340 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 PPP1R9AQ9ULJ8 1098 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 SYNPO2Q9UMS6 1093 aa26.47■■□□□ 1.83
MBD3-208ENST00000590830 PLXNB2O15031 1838 aa26.46■■□□□ 1.83
MBD3-208ENST00000590830 INHAP05111 366 aa26.46■■□□□ 1.83
MBD3-208ENST00000590830 CCL5P13501 91 aa26.46■■□□□ 1.83
MBD3-208ENST00000590830 TMEM132BQ14DG7 1078 aa26.46■■□□□ 1.83
MBD3-208ENST00000590830 MB21D1Q8N884 522 aa26.46■■□□□ 1.83
MBD3-208ENST00000590830 GMCL1P1Q8NEA9 526 aa26.46■■□□□ 1.83
MBD3-208ENST00000590830 TOMM22Q9NS69 142 aa26.46■■□□□ 1.83
MBD3-208ENST00000590830 ZNF213O14771 459 aa26.45■■□□□ 1.82
MBD3-208ENST00000590830 SLFN13Q68D06 897 aa26.45■■□□□ 1.82
MBD3-208ENST00000590830 REPS2Q8NFH8 660 aa26.45■■□□□ 1.82
MBD3-208ENST00000590830 KIAA0100Q14667 2235 aaKnown RBP26.45■■□□□ 1.82
MBD3-208ENST00000590830 VWA5AO00534 786 aa26.44■■□□□ 1.82
MBD3-208ENST00000590830 PTPREP23469 700 aa26.44■■□□□ 1.82
MBD3-208ENST00000590830 TRIM32Q13049 653 aa26.44■■□□□ 1.82
MBD3-208ENST00000590830 MFSD6Q6ZSS7 791 aa26.44■■□□□ 1.82
MBD3-208ENST00000590830 SOCS4Q8WXH5 440 aa26.44■■□□□ 1.82
MBD3-208ENST00000590830 UNC93B1Q9H1C4 597 aa26.44■■□□□ 1.82
MBD3-208ENST00000590830 STX8Q9UNK0 236 aa26.44■■□□□ 1.82
MBD3-208ENST00000590830 XRCC5P13010 732 aaKnown RBP26.43■■□□□ 1.82
MBD3-208ENST00000590830 ERCC3P19447 782 aa26.43■■□□□ 1.82
MBD3-208ENST00000590830 UBXN2AP68543 259 aa26.43■■□□□ 1.82
MBD3-208ENST00000590830 WDR78Q5VTH9 848 aa26.43■■□□□ 1.82
MBD3-208ENST00000590830 TRIB2Q92519 343 aa26.43■■□□□ 1.82
MBD3-208ENST00000590830 CHMP4CQ96CF2 233 aa26.43■■□□□ 1.82
MBD3-208ENST00000590830 SLF1Q9BQI6 1058 aa26.43■■□□□ 1.82
MBD3-208ENST00000590830 TCP11L1Q9NUJ3 509 aa26.43■■□□□ 1.82
MBD3-208ENST00000590830 A0A0G2JMZ2 1700 aa26.42■■□□□ 1.82
MBD3-208ENST00000590830 NEDD4P46934 1319 aa26.42■■□□□ 1.82
MBD3-208ENST00000590830 SLC15A5A6NIM6 579 aa26.42■■□□□ 1.82
MBD3-208ENST00000590830 PCP11498 1178 aaKnown RBP26.42■■□□□ 1.82
MBD3-208ENST00000590830 PTH1RQ03431 593 aa26.42■■□□□ 1.82
MBD3-208ENST00000590830 PLS1Q14651 629 aa26.42■■□□□ 1.82
MBD3-208ENST00000590830 CCL14Q16627 93 aa26.42■■□□□ 1.82
MBD3-208ENST00000590830 SHCBP1Q8NEM2 672 aa26.42■■□□□ 1.82
MBD3-208ENST00000590830 RAD50Q92878 1312 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 SGSM2O43147 1006 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 BMP3P12645 472 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 MCCP23508 829 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 MAP2K5Q13163 448 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 GRB14Q14449 540 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 RASGRP2Q7LDG7 609 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 RUFY2Q8WXA3 655 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 RNF208Q9H0X6 261 aa26.41■■□□□ 1.82
MBD3-208ENST00000590830 RNF41Q9H4P4 317 aaPredicted RBP26.41■■□□□ 1.82
MBD3-208ENST00000590830 CWC22Q9HCG8 908 aaKnown RBP26.41■■□□□ 1.82
MBD3-208ENST00000590830 ZNF214Q9UL59 606 aaPredicted RBP26.41■■□□□ 1.82
MBD3-208ENST00000590830 PARP14Q460N5 1801 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 MYH4Q9Y623 1939 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 RGS2P41220 211 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 PPP4R3BQ5MIZ7 849 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 RCSD1Q6JBY9 416 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 PRPF38AQ8NAV1 312 aaKnown RBP26.4■■□□□ 1.82
MBD3-208ENST00000590830 GMCL1Q96IK5 515 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 CTNNA3Q9UI47 895 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 FEM1BQ9UK73 627 aa26.4■■□□□ 1.82
MBD3-208ENST00000590830 HMGCRP04035 888 aa26.39■■□□□ 1.82
MBD3-208ENST00000590830 GJB1P08034 283 aa26.39■■□□□ 1.82
MBD3-208ENST00000590830 NCAPG2Q86XI2 1143 aa26.39■■□□□ 1.82
MBD3-208ENST00000590830 SHISA4Q96DD7 197 aa26.39■■□□□ 1.82
MBD3-208ENST00000590830 CCDC136Q96JN2 1154 aa26.39■■□□□ 1.82
MBD3-208ENST00000590830 TMEM47Q9BQJ4 181 aa26.39■■□□□ 1.82
MBD3-208ENST00000590830 STAT3P40763 770 aa26.38■■□□□ 1.81
MBD3-208ENST00000590830 IMMTQ16891 758 aaKnown RBP26.38■■□□□ 1.81
MBD3-208ENST00000590830 RIOX2Q8IUF8 465 aa26.38■■□□□ 1.81
MBD3-208ENST00000590830 NPLOC4Q8TAT6 608 aa26.38■■□□□ 1.81
MBD3-208ENST00000590830 KIFC2Q96AC6 838 aa26.38■■□□□ 1.81
MBD3-208ENST00000590830 MROH8Q9H579 483 aa26.38■■□□□ 1.81
MBD3-208ENST00000590830 FLRT1Q9NZU1 646 aa26.38■■□□□ 1.81
MBD3-208ENST00000590830 TNRC18O15417 2968 aaPredicted RBP26.38■■□□□ 1.81
MBD3-208ENST00000590830 RBBP6Q7Z6E9 1792 aaKnown RBP26.38■■□□□ 1.81
MBD3-208ENST00000590830 TMEM232C9JQI7 657 aa26.37■■□□□ 1.81
MBD3-208ENST00000590830 HOXC6P09630 235 aa26.37■■□□□ 1.81
MBD3-208ENST00000590830 ESR2Q92731 530 aa26.37■■□□□ 1.81
MBD3-208ENST00000590830 APBA2Q99767 749 aa26.37■■□□□ 1.81
MBD3-208ENST00000590830 ZKSCAN3Q9BRR0 538 aa26.37■■□□□ 1.81
MBD3-208ENST00000590830 PAK6Q9NQU5 681 aaPredicted RBP26.37■■□□□ 1.81
MBD3-208ENST00000590830 IVNS1ABPQ9Y6Y0 642 aa26.37■■□□□ 1.81
MBD3-208ENST00000590830 MKI67P46013 3256 aaKnown RBP26.37■■□□□ 1.81
MBD3-208ENST00000590830 B4E1Z4 1266 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 STRNO43815 780 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 COBLO75128 1261 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 KDM4AO75164 1064 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 SLC25A27O95847 323 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 TOP1P11387 765 aaKnown RBP26.36■■□□□ 1.81
MBD3-208ENST00000590830 ADORA2AP29274 412 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 SLC1A4P43007 532 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 GJA8P48165 433 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 MAP3K21Q5TCX8 1036 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 KCTD1Q719H9 257 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 SLC38A10Q9HBR0 1119 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms