RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 GDPD2Q9HCC8 539 aa20.92■□□□□ 0.94
CTDP1-205ENST00000590599 LMBRD1Q9NUN5 540 aa20.92■□□□□ 0.94
CTDP1-205ENST00000590599 KLRF2D3W0D1 207 aa20.92■□□□□ 0.94
CTDP1-205ENST00000590599 TRAK2O60296 914 aa20.92■□□□□ 0.94
CTDP1-205ENST00000590599 GNL2Q13823 731 aaKnown RBP20.92■□□□□ 0.94
CTDP1-205ENST00000590599 SAFBQ15424 915 aaKnown RBP eCLIP20.92■□□□□ 0.94
CTDP1-205ENST00000590599 PKN1Q16512 942 aa20.92■□□□□ 0.94
CTDP1-205ENST00000590599 SKOR2Q2VWA4 1001 aaPredicted RBP20.92■□□□□ 0.94
CTDP1-205ENST00000590599 TEPSINQ96N21 525 aa20.92■□□□□ 0.94
CTDP1-205ENST00000590599 SNHG28P0DPA3 235 aa20.91■□□□□ 0.94
CTDP1-205ENST00000590599 KIF23Q02241 960 aaPredicted RBP20.91■□□□□ 0.94
CTDP1-205ENST00000590599 MAP3K10Q02779 954 aa20.91■□□□□ 0.94
CTDP1-205ENST00000590599 BRAPQ7Z569 592 aa20.91■□□□□ 0.94
CTDP1-205ENST00000590599 MKL1Q969V6 931 aa20.91■□□□□ 0.94
CTDP1-205ENST00000590599 GLIS2Q9BZE0 524 aaPredicted RBP20.91■□□□□ 0.94
CTDP1-205ENST00000590599 GGA3Q9NZ52 723 aa20.91■□□□□ 0.94
CTDP1-205ENST00000590599 SCG2P13521 617 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 JAG1P78504 1218 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 TMEM87AQ8NBN3 555 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 SPZ1Q9BXG8 430 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 ZBTB21Q9ULJ3 1066 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 MMP1P03956 469 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 PFKFB3Q16875 520 aaPredicted RBP20.9■□□□□ 0.94
CTDP1-205ENST00000590599 USP48Q86UV5 1035 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 KLRG1Q96E93 195 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 ZNF396Q96N95 335 aaPredicted RBP20.9■□□□□ 0.94
CTDP1-205ENST00000590599 VPS54Q9P1Q0 977 aa20.9■□□□□ 0.94
CTDP1-205ENST00000590599 FRMPD2Q68DX3 1309 aaPredicted RBP20.9■□□□□ 0.94
CTDP1-205ENST00000590599 BAZ2BQ9UIF8 2168 aaKnown RBP20.89■□□□□ 0.94
CTDP1-205ENST00000590599 SMARCA1P28370 1054 aa20.89■□□□□ 0.93
CTDP1-205ENST00000590599 CCDC96Q2M329 555 aa20.89■□□□□ 0.93
CTDP1-205ENST00000590599 CFAP45Q9UL16 551 aa20.89■□□□□ 0.93
CTDP1-205ENST00000590599 KCNJ14Q9UNX9 436 aa20.89■□□□□ 0.93
CTDP1-205ENST00000590599 KIF28PB7ZC32 967 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 RAD21O60216 631 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 CAP2P40123 477 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 ZNF543Q08ER8 600 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 ATL3Q6DD88 541 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 HOOK2Q96ED9 719 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 ATAD5Q96QE3 1844 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 SCAND2PQ9GZW5 306 aaPredicted RBP20.88■□□□□ 0.93
CTDP1-205ENST00000590599 ARHGEF10LQ9HCE6 1279 aa20.88■□□□□ 0.93
CTDP1-205ENST00000590599 CYTH3O43739 400 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 GPATCH4Q5T3I0 446 aaKnown RBP20.87■□□□□ 0.93
CTDP1-205ENST00000590599 SIAH1Q8IUQ4 282 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 DCAF4Q8WV16 495 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 GPCPD1Q9NPB8 672 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 TFIP11Q9UBB9 837 aaKnown RBP20.87■□□□□ 0.93
CTDP1-205ENST00000590599 SYNPO2Q9UMS6 1093 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 PPP2R3BQ9Y5P8 575 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 DDX49Q9Y6V7 483 aaKnown RBP20.87■□□□□ 0.93
CTDP1-205ENST00000590599 SLC35G1Q2M3R5 365 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 CST9Q5W186 159 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 DCAF15Q66K64 600 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 SLFN13Q68D06 897 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 DIS3L2Q8IYB7 885 aaKnown RBP20.87■□□□□ 0.93
CTDP1-205ENST00000590599 GMCL1P1Q8NEA9 526 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 RRP36Q96EU6 259 aaKnown RBP20.87■□□□□ 0.93
CTDP1-205ENST00000590599 SPATA32Q96LK8 384 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 CPVLQ9H3G5 476 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 CREBZFQ9NS37 354 aa20.87■□□□□ 0.93
CTDP1-205ENST00000590599 SEC63Q9UGP8 760 aaKnown RBP20.87■□□□□ 0.93
CTDP1-205ENST00000590599 ISY1Q9ULR0 285 aaKnown RBP20.87■□□□□ 0.93
CTDP1-205ENST00000590599 PITPNM2Q9BZ72 1349 aa20.86■□□□□ 0.93
CTDP1-205ENST00000590599 ASNSP08243 561 aa20.86■□□□□ 0.93
CTDP1-205ENST00000590599 U2AF2P26368 475 aaKnown RBP eCLIP20.86■□□□□ 0.93
CTDP1-205ENST00000590599 NBPF12Q5TAG4 269 aaPredicted RBP20.86■□□□□ 0.93
CTDP1-205ENST00000590599 PHF20Q9BVI0 1012 aa20.86■□□□□ 0.93
CTDP1-205ENST00000590599 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
CTDP1-205ENST00000590599 SLC1A4P43007 532 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 MYSM1Q5VVJ2 828 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 UBA5Q9GZZ9 404 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 FOXP1Q9H334 677 aaPredicted RBP20.85■□□□□ 0.93
CTDP1-205ENST00000590599 ELP1O95163 1332 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 TMEM88BA6NKF7 163 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 PHF20L1A8MW92 1017 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 F5H6K3 240 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 MBD3O95983 291 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 KLRC3Q07444 240 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 KLHL40Q2TBA0 621 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 HOMER1Q86YM7 354 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 VAT1LQ9HCJ6 419 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 SH3GLB2Q9NR46 395 aa20.85■□□□□ 0.93
CTDP1-205ENST00000590599 BTBD18B2RXH4 712 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 ADM5C9JUS6 153 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 KRT2P35908 639 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 KCTD1Q719H9 257 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 HEATR3Q7Z4Q2 680 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 NOSTRINQ8IVI9 506 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 LEO1Q8WVC0 666 aaPredicted RBP20.84■□□□□ 0.93
CTDP1-205ENST00000590599 GPKOWQ92917 476 aaPredicted RBP eCLIP20.84■□□□□ 0.93
CTDP1-205ENST00000590599 SHISA4Q96DD7 197 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 ZNF341Q9BYN7 854 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 RIOX1Q9H6W3 641 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 SH2D4AQ9H788 454 aa20.84■□□□□ 0.93
CTDP1-205ENST00000590599 NDUFB10O96000 172 aa20.83■□□□□ 0.93
CTDP1-205ENST00000590599 NLRP5P59047 1200 aa20.83■□□□□ 0.93
CTDP1-205ENST00000590599 CEBPZQ03701 1054 aaKnown RBP20.83■□□□□ 0.93
CTDP1-205ENST00000590599 CCDC148Q8NFR7 591 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms