RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 MOV10L1Q9BXT6 1211 aaKnown RBP14.31□□□□□ -0.12
TPM4-212ENST00000590180 SPATC1LQ9H0A9 340 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 STX8Q9UNK0 236 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
TPM4-212ENST00000590180 TACC3Q9Y6A5 838 aa14.31□□□□□ -0.12
TPM4-212ENST00000590180 PDE4DIPQ5VU43 2346 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 SLC15A5A6NIM6 579 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 ZNF213O14771 459 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 ORC4O43929 436 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 TFRCP02786 760 aaKnown RBP14.3□□□□□ -0.12
TPM4-212ENST00000590180 HMGCRP04035 888 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 XRCC5P13010 732 aaKnown RBP14.3□□□□□ -0.12
TPM4-212ENST00000590180 GSPT1P15170 499 aaKnown RBP14.3□□□□□ -0.12
TPM4-212ENST00000590180 ERCC3P19447 782 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 MORN1Q5T089 497 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 NCAPG2Q86XI2 1143 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 PPP1R9AQ9ULJ8 1098 aa14.3□□□□□ -0.12
TPM4-212ENST00000590180 NMT2O60551 498 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
TPM4-212ENST00000590180 STAT3P40763 770 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 TRIM32Q13049 653 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 TMEM132BQ14DG7 1078 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 DPP9Q86TI2 863 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 TRMT44Q8IYL2 757 aaKnown RBP14.29□□□□□ -0.12
TPM4-212ENST00000590180 PRPF38AQ8NAV1 312 aaKnown RBP14.29□□□□□ -0.12
TPM4-212ENST00000590180 SHCBP1Q8NEM2 672 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 TRIB2Q92519 343 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 USP6NLQ92738 828 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 KIFC2Q96AC6 838 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 DEFB118Q96PH6 123 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 SLF1Q9BQI6 1058 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 HMX1Q9NP08 348 aaPredicted RBP14.29□□□□□ -0.12
TPM4-212ENST00000590180 IL17RBQ9NRM6 502 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 ADAMTS5Q9UNA0 930 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 MTMR7Q9Y216 660 aa14.29□□□□□ -0.12
TPM4-212ENST00000590180 VWA5AO00534 786 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 STRNO43815 780 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 ZBED4O75132 1171 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 SGPL1O95470 568 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 FGRP09769 529 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 BMP3P12645 472 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 MCCP23508 829 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 GJA8P48165 433 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 CCL14Q16627 93 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 GMCL1P1Q8NEA9 526 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 U2AF1L4Q8WU68 220 aaKnown RBP14.28□□□□□ -0.12
TPM4-212ENST00000590180 RUFY2Q8WXA3 655 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 RNF41Q9H4P4 317 aaPredicted RBP14.28□□□□□ -0.12
TPM4-212ENST00000590180 MROH8Q9H579 483 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 CTNNA3Q9UI47 895 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 FEM1BQ9UK73 627 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 SYNPO2Q9UMS6 1093 aa14.28□□□□□ -0.12
TPM4-212ENST00000590180 RPTORQ8N122 1335 aa14.27□□□□□ -0.12
TPM4-212ENST00000590180 TMEM232C9JQI7 657 aa14.27□□□□□ -0.13
TPM4-212ENST00000590180 SLC25A27O95847 323 aa14.27□□□□□ -0.13
TPM4-212ENST00000590180 SLC1A4P43007 532 aa14.27□□□□□ -0.13
TPM4-212ENST00000590180 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
TPM4-212ENST00000590180 CPXCR1Q8N123 301 aa14.27□□□□□ -0.13
TPM4-212ENST00000590180 APBA2Q99767 749 aa14.27□□□□□ -0.13
TPM4-212ENST00000590180 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.13
TPM4-212ENST00000590180 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.27□□□□□ -0.135e-7■■■■■ 28.2
TPM4-212ENST00000590180 PLIN4Q96Q06 1357 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 ZMYM6O95789 1325 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 PCP11498 1178 aaKnown RBP14.26□□□□□ -0.13
TPM4-212ENST00000590180 FCER1AP12319 257 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
TPM4-212ENST00000590180 CHMLP26374 656 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 ADORA2AP29274 412 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 GRB14Q14449 540 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 IMMTQ16891 758 aaKnown RBP14.26□□□□□ -0.13
TPM4-212ENST00000590180 MFSD14CQ5VZR4 134 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 RIOX2Q8IUF8 465 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 TBC1D10CQ8IV04 446 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 NPLOC4Q8TAT6 608 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 CHURC1Q8WUH1 139 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 STAG1Q8WVM7 1258 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 ESR2Q92731 530 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 SLC5A4Q9NY91 659 aa14.26□□□□□ -0.13
TPM4-212ENST00000590180 HTTP42858 3142 aa14.25□□□□□ -0.13
TPM4-212ENST00000590180 TOP1P11387 765 aaKnown RBP14.25□□□□□ -0.13
TPM4-212ENST00000590180 CACNB2Q08289 660 aaPredicted RBP14.25□□□□□ -0.13
TPM4-212ENST00000590180 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
TPM4-212ENST00000590180 KCTD1Q719H9 257 aa14.25□□□□□ -0.13
TPM4-212ENST00000590180 CENPQQ7L2Z9 268 aaPredicted RBP14.25□□□□□ -0.13
TPM4-212ENST00000590180 MMP19Q99542 508 aa14.25□□□□□ -0.13
TPM4-212ENST00000590180 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
TPM4-212ENST00000590180 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
TPM4-212ENST00000590180 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
TPM4-212ENST00000590180 FLRT1Q9NZU1 646 aa14.25□□□□□ -0.13
TPM4-212ENST00000590180 COBLO75128 1261 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 HOXC6P09630 235 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 COPB2P35606 906 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 KCTD2Q14681 263 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 CCDC96Q2M329 555 aa14.24□□□□□ -0.13
TPM4-212ENST00000590180 SNRNP48Q6IEG0 339 aaKnown RBP14.24□□□□□ -0.13
TPM4-212ENST00000590180 FAM160B2Q86V87 743 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms