RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 MX1P20591 662 aa17.14■□□□□ 0.33
MBD1-220ENST00000589758 IRX6P78412 446 aaPredicted RBP17.14■□□□□ 0.33
MBD1-220ENST00000589758 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
MBD1-220ENST00000589758 IFNL3Q8IZI9 196 aa17.14■□□□□ 0.33
MBD1-220ENST00000589758 EPB41L4AQ9HCS5 686 aaPredicted RBP17.14■□□□□ 0.33
MBD1-220ENST00000589758 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
MBD1-220ENST00000589758 PARP14Q460N5 1801 aa17.14■□□□□ 0.33
MBD1-220ENST00000589758 ALPK3Q96L96 1907 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 RAD21O60216 631 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 IGHA2P01877 340 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
MBD1-220ENST00000589758 COL6A1P12109 1028 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 FCER1AP12319 257 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 CNGA1P29973 690 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 CYP2C19P33261 490 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 COPB2P35606 906 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 C7orf61Q8IZ16 206 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 STK11IPQ8N1F8 1099 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 OTUD7AQ8TE49 926 aaPredicted RBP17.13■□□□□ 0.33
MBD1-220ENST00000589758 PPP1R9AQ9ULJ8 1098 aa17.13■□□□□ 0.33
MBD1-220ENST00000589758 VWA5AO00534 786 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 AAMPQ13685 434 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 ZMYM1Q5SVZ6 1142 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 RIOX2Q8IUF8 465 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 SYNPO2Q9UMS6 1093 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 PFASO15067 1338 aa17.12■□□□□ 0.33
MBD1-220ENST00000589758 F5H6K3 240 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 COBLO75128 1261 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 CYBAP13498 195 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 STAT3P40763 770 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 PDE4BQ07343 736 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 KLRC3Q07444 240 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 HDAC1Q13547 482 aaPredicted RBP17.11■□□□□ 0.33
MBD1-220ENST00000589758 MKL1Q969V6 931 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
MBD1-220ENST00000589758 NAPBQ9H115 298 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 CLIP2Q9UDT6 1046 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
MBD1-220ENST00000589758 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
MBD1-220ENST00000589758 FRMPD3Q5JV73 1810 aa17.1■□□□□ 0.33
MBD1-220ENST00000589758 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
MBD1-220ENST00000589758 KCTD2Q14681 263 aa17.1■□□□□ 0.33
MBD1-220ENST00000589758 MMP19Q99542 508 aa17.1■□□□□ 0.33
MBD1-220ENST00000589758 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
MBD1-220ENST00000589758 STAP2Q9UGK3 403 aa17.1■□□□□ 0.33
MBD1-220ENST00000589758 CEP290O15078 2479 aa17.1■□□□□ 0.33
MBD1-220ENST00000589758 DNM1LO00429 736 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 PRDM1O75626 825 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 TTLL1O95922 423 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 NDUFB10O96000 172 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 BMP8BP34820 402 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
MBD1-220ENST00000589758 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 TRPV1Q8NER1 839 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 EVI5LQ96CN4 794 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 MAML3Q96JK9 1138 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 MTMR4Q9NYA4 1195 aa17.09■□□□□ 0.33
MBD1-220ENST00000589758 ZNF214Q9UL59 606 aaPredicted RBP17.09■□□□□ 0.33
MBD1-220ENST00000589758 DIS3Q9Y2L1 958 aaKnown RBP17.09■□□□□ 0.33
MBD1-220ENST00000589758 ZNFX1Q9P2E3 1918 aaKnown RBP17.08■□□□□ 0.33
MBD1-220ENST00000589758 PLIN4Q96Q06 1357 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 SEPT4O43236 478 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 TSPY3P0CV98 308 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 PPARAQ07869 468 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 PPP4R3BQ5MIZ7 849 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 REPS2Q8NFH8 660 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 NUP88Q99567 741 aaPredicted RBP17.08■□□□□ 0.32
MBD1-220ENST00000589758 GDF15Q99988 308 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 ZMYND8Q9ULU4 1186 aaPredicted RBP17.08■□□□□ 0.32
MBD1-220ENST00000589758 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.32
MBD1-220ENST00000589758 MYH4Q9Y623 1939 aa17.08■□□□□ 0.32
MBD1-220ENST00000589758 ATP2A1O14983 1001 aa17.07■□□□□ 0.32
MBD1-220ENST00000589758 ZBED4O75132 1171 aa17.07■□□□□ 0.32
MBD1-220ENST00000589758 PDE1AP54750 535 aa17.07■□□□□ 0.32
MBD1-220ENST00000589758 GMCL1P1Q8NEA9 526 aa17.07■□□□□ 0.32
MBD1-220ENST00000589758 TEX13BQ9BXU2 312 aa17.07■□□□□ 0.32
MBD1-220ENST00000589758 SENP6Q9GZR1 1112 aaPredicted RBP17.07■□□□□ 0.32
MBD1-220ENST00000589758 FEM1BQ9UK73 627 aa17.07■□□□□ 0.32
MBD1-220ENST00000589758 SYN1P17600 705 aa17.06■□□□□ 0.32
MBD1-220ENST00000589758 TFAP4Q01664 338 aa17.06■□□□□ 0.32
MBD1-220ENST00000589758 LRRC26Q2I0M4 334 aa17.06■□□□□ 0.32
MBD1-220ENST00000589758 HELLSQ9NRZ9 838 aa17.06■□□□□ 0.32
MBD1-220ENST00000589758 KBTBD13C9JR72 458 aa17.05■□□□□ 0.32
MBD1-220ENST00000589758 PGK2P07205 417 aa17.05■□□□□ 0.32
MBD1-220ENST00000589758 FDX1P10109 184 aa17.05■□□□□ 0.32
MBD1-220ENST00000589758 ZNF792Q3KQV3 632 aa17.05■□□□□ 0.32
MBD1-220ENST00000589758 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
MBD1-220ENST00000589758 PRAMEF19Q5SWL8 479 aa17.05■□□□□ 0.32
MBD1-220ENST00000589758 MSL3Q8N5Y2 521 aaKnown RBP17.05■□□□□ 0.32
MBD1-220ENST00000589758 TINF2Q9BSI4 451 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms