RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 WDR46O15213 610 aaKnown RBP11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 EPB41L2O43491 1005 aaKnown RBP11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 REC8O95072 547 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 SNHG28P0DPA3 235 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 OSBPP22059 807 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 SOX10P56693 466 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 SP3Q02447 781 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 SLC35G1Q2M3R5 365 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 ANKRD13CQ8N6S4 541 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 ATG4CQ96DT6 458 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 TCEANC2Q96MN5 208 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 NEK1Q96PY6 1258 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 PARK7Q99497 189 aaKnown RBP11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
CHAF1A-206ENST00000587739 ZSWIM8A7E2V4 1837 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 IFIT3O14879 490 aaKnown RBP11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 PRC1O43663 620 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 RAD21O60216 631 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 FKTNO75072 461 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 PDHBP11177 359 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 BMP3P12645 472 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 NT5C2P49902 561 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 TRDNQ13061 729 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 PABPC4Q13310 644 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 KCTD1Q719H9 257 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 IQCA1Q86XH1 822 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 CD99L2Q8TCZ2 262 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 SH2D4AQ9H788 454 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 MORF4L1Q9UBU8 362 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 MTMR7Q9Y216 660 aa11.47□□□□□ -0.57
CHAF1A-206ENST00000587739 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 SH2B2O14492 632 aaPredicted RBP11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 FLOT1O75955 427 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 GOLGA8HP0CJ92 632 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 SNAP25P60880 206 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 IRX3P78415 501 aaPredicted RBP11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 LACTBP83111 547 aaPredicted RBP11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 TROAPQ12815 778 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 BTNL9Q6UXG8 535 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 DHX32Q7L7V1 743 aaKnown RBP11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 STAG2Q8N3U4 1231 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 PNMA1Q8ND90 353 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 IL17RAQ96F46 866 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 TANGO6Q9C0B7 1094 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 PORCNQ9H237 461 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 CPVLQ9H3G5 476 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 PPP1R9AQ9ULJ8 1098 aa11.46□□□□□ -0.57
CHAF1A-206ENST00000587739 BAZ2BQ9UIF8 2168 aaKnown RBP11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 FRMPD2Q68DX3 1309 aaPredicted RBP11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 VWA5AO00534 786 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 PLA2G6O60733 806 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 MCM5P33992 734 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 SLC16A2P36021 539 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 SLC1A4P43007 532 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 ZNF543Q08ER8 600 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 TMEM132BQ14DG7 1078 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 FAM110CQ1W6H9 321 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 CCDC178Q5BJE1 867 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 TMEM67Q5HYA8 995 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 RNF20Q5VTR2 975 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 NBPF11Q86T75 865 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 SMCR8Q8TEV9 937 aaPredicted RBP11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 DCAF4Q8WV16 495 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 JAKMIP1Q96N16 626 aaKnown RBP11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 UBAC1Q9BSL1 405 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 UBA5Q9GZZ9 404 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 GJD2Q9UKL4 321 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 BRPF3Q9ULD4 1205 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 RABGAP1Q9Y3P9 1069 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 HTTP42858 3142 aa11.45□□□□□ -0.58
CHAF1A-206ENST00000587739 ZNF536O15090 1300 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 ZKSCAN1P17029 563 aaPredicted RBP11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 ERVK-9P63128 1117 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 ERVK-24P63145 666 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 WTAPQ15007 396 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 IFIT1BQ5T764 474 aaKnown RBP11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 OTOP1Q7RTM1 612 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 CTU1Q7Z7A3 348 aaKnown RBP11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 PRPF38AQ8NAV1 312 aaKnown RBP11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 GPRC5AQ8NFJ5 357 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 KIF2CQ99661 725 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
CHAF1A-206ENST00000587739 MTA3Q9BTC8 594 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms