RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 GMPSP49915 693 aaPredicted RBP22.83■■□□□ 1.25
TRIM47-204ENST00000587339 SEPT2Q15019 361 aa22.83■■□□□ 1.25
TRIM47-204ENST00000587339 RBM26Q5T8P6 1007 aaKnown RBP22.83■■□□□ 1.25
TRIM47-204ENST00000587339 GPKOWQ92917 476 aaPredicted RBP eCLIP22.83■■□□□ 1.25
TRIM47-204ENST00000587339 CABP5Q9NP86 173 aa22.83■■□□□ 1.25
TRIM47-204ENST00000587339 FRMPD2Q68DX3 1309 aaPredicted RBP22.83■■□□□ 1.25
TRIM47-204ENST00000587339 EEF2P13639 858 aaKnown RBP22.82■■□□□ 1.24
TRIM47-204ENST00000587339 CALML3P27482 149 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 MRE11P49959 708 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 ICA1Q05084 483 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 NPY5RQ15761 445 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 CCAR1Q8IX12 1150 aaKnown RBP22.82■■□□□ 1.24
TRIM47-204ENST00000587339 RRP36Q96EU6 259 aaKnown RBP22.82■■□□□ 1.24
TRIM47-204ENST00000587339 TMEM39BQ9GZU3 492 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 GRPEL1Q9HAV7 217 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 DDX19AQ9NUU7 478 aaKnown RBP22.82■■□□□ 1.24
TRIM47-204ENST00000587339 NR1I2O75469 434 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 TOB1P50616 345 aaPredicted RBP22.82■■□□□ 1.24
TRIM47-204ENST00000587339 ARHGAP27Q6ZUM4 889 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 HEATR3Q7Z4Q2 680 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 MICALL2Q8IY33 904 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 JMYQ8N9B5 988 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 MKL1Q969V6 931 aa22.82■■□□□ 1.24
TRIM47-204ENST00000587339 SEC63Q9UGP8 760 aaKnown RBP22.82■■□□□ 1.24
TRIM47-204ENST00000587339 TNNI2P48788 182 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 ZNF543Q08ER8 600 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 PTPAQ15257 358 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 WWC2Q6AWC2 1192 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 HOMER1Q86YM7 354 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 UBA5Q9GZZ9 404 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 NUP62CLQ9H1M0 184 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 BARHL2Q9NY43 387 aa22.81■■□□□ 1.24
TRIM47-204ENST00000587339 PPP6R2O75170 966 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 GH2P01242 217 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 GPATCH4Q5T3I0 446 aaKnown RBP22.8■■□□□ 1.24
TRIM47-204ENST00000587339 CCDC73Q6ZRK6 1079 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 CCDC148Q8NFR7 591 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 RIOX1Q9H6W3 641 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 VAT1LQ9HCJ6 419 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 CNOT7Q9UIV1 285 aaKnown RBP22.8■■□□□ 1.24
TRIM47-204ENST00000587339 A0A1W2PQ27 194 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 A0A1W2PQ64 194 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 A0A1W2PQD8 194 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 EGFRP00533 1210 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 MARCKSP29966 332 aaPredicted RBP22.8■■□□□ 1.24
TRIM47-204ENST00000587339 GPCPD1Q9NPB8 672 aa22.8■■□□□ 1.24
TRIM47-204ENST00000587339 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.8■■□□□ 1.24
TRIM47-204ENST00000587339 ZNF541Q9H0D2 1346 aa22.79■■□□□ 1.24
TRIM47-204ENST00000587339 RRP1BQ14684 758 aaKnown RBP22.79■■□□□ 1.24
TRIM47-204ENST00000587339 FAM177A1Q8N128 213 aaPredicted RBP22.79■■□□□ 1.24
TRIM47-204ENST00000587339 MRPS27Q92552 414 aaKnown RBP22.79■■□□□ 1.24
TRIM47-204ENST00000587339 TNFRSF25Q93038 417 aa22.79■■□□□ 1.24
TRIM47-204ENST00000587339 MYH4Q9Y623 1939 aa22.79■■□□□ 1.24
TRIM47-204ENST00000587339 RAD21O60216 631 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 TBC1D12O60347 775 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 LMNB1P20700 586 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 TNFAIP1Q13829 316 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 CCDC96Q2M329 555 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 TYW1BQ6NUM6 668 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 SAMD7Q7Z3H4 446 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 SIAH1Q8IUQ4 282 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 CDAN1Q8IWY9 1227 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 FSIP1Q8NA03 581 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 PIGSQ96S52 555 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 GOLPH3LQ9H4A5 285 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 PCDHA4Q9UN74 947 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 STXBP3O00186 592 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 JAG1P78504 1218 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 CAMK4Q16566 473 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 EARS2Q5JPH6 523 aaKnown RBP22.78■■□□□ 1.24
TRIM47-204ENST00000587339 BLIDQ8IZY5 108 aa22.78■■□□□ 1.24
TRIM47-204ENST00000587339 CCDC12Q8WUD4 166 aaPredicted RBP22.78■■□□□ 1.24
TRIM47-204ENST00000587339 NOL7Q9UMY1 257 aaKnown RBP22.78■■□□□ 1.24
TRIM47-204ENST00000587339 FAM205CA6NFA0 338 aa22.77■■□□□ 1.24
TRIM47-204ENST00000587339 XRCC6P12956 609 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRIM47-204ENST00000587339 ATP2B1P20020 1258 aa22.77■■□□□ 1.24
TRIM47-204ENST00000587339 FAM160A1Q05DH4 1040 aa22.77■■□□□ 1.24
TRIM47-204ENST00000587339 TBC1D10BQ4KMP7 808 aaPredicted RBP22.77■■□□□ 1.24
TRIM47-204ENST00000587339 AXDND1Q5T1B0 1012 aaPredicted RBP22.77■■□□□ 1.24
TRIM47-204ENST00000587339 GALNT17Q6IS24 598 aa22.77■■□□□ 1.24
TRIM47-204ENST00000587339 TNMDQ9H2S6 317 aa22.77■■□□□ 1.24
TRIM47-204ENST00000587339 CEP131Q9UPN4 1083 aa22.77■■□□□ 1.24
TRIM47-204ENST00000587339 PCDHB6Q9Y5E3 794 aa22.77■■□□□ 1.24
TRIM47-204ENST00000587339 SLC1A4P43007 532 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 RASA3Q14644 834 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 KCTD1Q719H9 257 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 MIGA2Q7L4E1 593 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 CLSTN2Q9H4D0 955 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 PGAP2Q9UHJ9 254 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 NAPAP54920 295 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 SNW1Q13573 536 aaKnown RBP22.76■■□□□ 1.23
TRIM47-204ENST00000587339 SLFN13Q68D06 897 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 DCAF4Q8WV16 495 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 TSPY26PQ9H489 355 aa22.76■■□□□ 1.23
TRIM47-204ENST00000587339 TRIM75PA6NK02 468 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 hCG_1984214I3L0E3 225 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 MAP3K11Q16584 847 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 KIF4BQ2VIQ3 1234 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 TTBK2Q6IQ55 1244 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 PIK3AP1Q6ZUJ8 805 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms